Zingiber officinale (ginger): 122051087
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Entry
122051087 CDS
T08725
Name
(RefSeq) protein SHORT-ROOT 1-like
KO
K27743
protein SHORT-ROOT
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122051087
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
GRAS
122051087
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Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF7018
Motif
Other DBs
NCBI-GeneID:
122051087
NCBI-ProteinID:
XP_042467971
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Position
3A:5608033..5610325
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AA seq
521 aa
AA seq
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MDTLFRFFSPQSNSHNQQSSYDLSRNSSSSRSSGDPSLHQISSNYYLEQPNYSFPHQDPY
SHRDQECGTDHRDLYMDEDFSSSSSSKHLGHRPPATSTPVFDPAAAAADLNLDIFSSPVS
SSSTAAAASDGGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYF
LQGLFARLTSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEA
FLEETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSSMQRVMKEIG
QRMEKFARLMGVPFRFNVIHHPGDLSSLDLDDLDLSGDNSVSGLAVNCVNALHAISPSGR
RRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFEESLRFFTAYLESLEESF
PRATNELLALERAAGRAVVDLVSCSPSESEERRETAAAWSRRMRTAGFAPAAFSEDVTDD
VRALLRRYREGWSMRAPAADEAGVFLEWREQAVVWASAWKP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctatttagattttttagcccgcaatccaattctcataatcagcaatcttcc
tacgatctgagtcgaaattcaagcagctccaggtcatcgggtgatccgtctctgcatcag
atcagcagtaactactacttggagcaacccaattattcgttccctcatcaggatccgtac
tcgcatcgagatcaagaatgcggcaccgatcatcgcgacctttacatggatgaagacttc
tcctcctcctcctcctccaagcacttgggccaccgtccgcccgccacgtcgaccccggtg
ttcgaccccgctgcagcggcggctgatctcaacctcgacatcttctcttcgcccgtttcc
tcctcctccactgccgccgccgcatcggacggcggggggaggtgggcgtcgaagctgctg
ctcgagtgcgcgcgcgccgtggcagcgcgcgacacccagcgggctcagcatctgacgtgg
atgctcaacgaactggcctcgccttacggggacgccgagcagaaggtggccgcctacttc
ctgcagggcctcttcgctcggctgacgtcgtccgggccgcgaacgctgcggaccctcacg
ggcgcctcagaccgcaactgttccttcgagtctgcccgccgaactgcgctgcgtttccag
gaagtcagcccctggtcctccttcggccacgtggctgccaacggagctatactcgaggcc
ttcctcgaggagacgccgcagcgactgcacatcctcgacctcagcaccaccttctgcacg
cagtggccgacactcttggaggcgctcgccacgcgctcggccgacgacacgccgcacctc
accatcaccactgtggccgcggcctcttcatccatgcaacgcgtgatgaaggagatcggt
cagcggatggagaaattcgcgcgcctcatgggcgtccccttccgcttcaacgtcatccac
catcccggcgacctatcctctctcgacttggacgacctcgacctcagcggcgataactcc
gtctccggcctagccgttaattgtgtcaatgccttgcatgccatctcaccgagcggccgg
cggcgggatggctttctggccgccatccgaaggctgcggccgcggatcgtgactgtcgtg
gaggaagaggccgacctcgcgagtagcgaggcgccggaggaaggggaggcgttcgtgaag
gtgtttgaggagagcttgcgattcttcacggcttacctggagtcgctggaggaaagcttc
cctcgcgcaaccaacgaacttctggcgctggagagggcggctgggagggcagtggtggat
ctcgtctcgtgctcgccttccgagtcggaggaaaggagggagacggcggcagcatggtcg
agacggatgcgcacggcggggttcgcgccagcggccttcagcgaggacgtgaccgacgac
gtgagggcgctgctgcgaaggtaccgagagggttggtcgatgcgggcgcctgcggccgac
gaagccggcgtgttcctggaatggagggagcaggcggtggtgtgggcgagcgcctggaag
ccatga
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