Zingiber officinale (ginger): 122051219
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Entry
122051219 CDS
T08725
Name
(RefSeq) protein YABBY 2-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122051219
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
122051219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box
HMG_box_2
Zn_ribbon_Elf1
Ccdc124
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
122051219
NCBI-ProteinID:
XP_042468156
LinkDB
All DBs
Position
3A:17532388..17536422
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AA seq
170 aa
AA seq
DB search
MSSLSSQHAFAPEQVCYVNCNFCNTVLVVNVPSDNSLNVATVRCGLCANLLSVNLQVQLE
KLPLHKLQNREMGGAPNIYDGDCESSSRCSSLSALSPMDYVHHQMQLIQPATEKRRVPSA
YNRFIKEEIRRLKAKDPNISHKEAFSTAAKNWAHFPEIRFGLSIRGNEQV
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgttgtcatcgcagcatgcttttgctccagagcaggtttgctatgtcaattgc
aacttctgcaacactgttcttgtggttaatgtgccgagtgataattcattgaatgtggcg
actgtccgatgtggtctttgtgccaatctgctctctgtcaatctacaagttcagttagaa
aaactcccactccataagcttcagaatcgagaaatgggaggggccccaaacatctacgat
ggagattgtgaatcttcttcaagatgcagcagtctctcagcgttgagcccgatggactac
gttcaccaccaaatgcaacttatccaacccgcaacggagaagcggcgtgttccttctgcc
tacaacagatttatcaaggaagagatccgccgactgaaagctaaagatcccaacattagc
cacaaggaagctttcagcactgcagccaaaaactgggcgcacttcccagagatccgtttc
gggctatcaatccgtggcaatgaacaagtttaa
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