Zingiber officinale (ginger): 122051250
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Entry
122051250 CDS
T08725
Name
(RefSeq) two-component response regulator ORR22-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122051250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122051250
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122051250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122051250
NCBI-ProteinID:
XP_042468203
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Position
1B:13878846..13882889
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AA seq
677 aa
AA seq
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MGRDGGQDEQFPVGMRVLAVDDDPTCLKVLEAMLLRCRYNVTTTNKATSALKLLREKREY
FDLVISDVHMPDMDGFRLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRI
EELKNIWQHVVRRRKLAHKKYSHFDNGEESDKHQIVSKEAGDGLNLNGSPNQNEKFSRKR
KDQNEEDEDNCEENMLENEDSTTQKKQRVVWSMDLHRKFVAAVNQMGIDKAVPKRILELM
NVEKLTRENVASHLQKYRLYLRRLSAAASRQVNMVAAFGGRDSYISSLDDFGTFQTLGAS
GKLQAIRSLQSSEVLVNANTSGLGLHDRFSSSIIQVGNSNTNIPPADISRLQPIILPSNQ
YGRLVQGVPTSLELQQLQLKRIHKPISHFPGSLSGSRISIPNNSFSNVANSDFIAQSPER
QTPSRTLANLSSSTSLSTSLDPSLVSVGFSSELPDASRCKADLQSAVPLTPYTTSTPSIV
SFTNNENLPNFLDNFPVAQRGSSSQSISSTSTIVSPSQDPFIGKDAKCHKSSSGGPSMLL
LATMDEERNYLNFSNASNSKQREPKEEHIYEQEALFNSFSSTANLVTNSVSGNQRVNNSL
HNPGYSICSPSCQIDKSDNHSSQKDKFNWEIMKVQGGSVLFDCFLDDAVGSLIKPEKDHI
SFAENSESDMYPLDACL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggatggcggacaagacgaacagttccctgttggaatgcgcgtcctcgccgtc
gacgacgatcccacttgcctcaaagtgttggaggccatgttacttcgatgccgatacaat
gttacaacgacgaataaggctacttcggctctgaagttgctcagggagaagagggagtac
ttcgatctagttatcagtgatgtgcatatgccagatatggatgggttcaggcttctagag
ctcgtgggcctcgagatggaccttcctgttatcatgctctcagtgaatggtgagactaaa
actgtcatgaaaggcataactcatggtgcttgcgactacttgcttaaacctgttcggatt
gaggagctcaagaatatatggcagcatgttgttaggagaaggaagttagctcacaaaaag
tatagtcattttgataatggggaagaatcagacaaacaccaaattgttagtaaagaagct
ggagatggtctgaatctgaatggctcacccaatcaaaatgaaaagtttagtaggaagagg
aaggaccagaatgaggaagatgaagacaattgcgaggagaatatgctggagaatgaggat
tcaactactcaaaaaaagcaaagggttgtttggtctatggacctacacaggaagtttgta
gccgctgttaatcagatgggaattgataaggctgtacctaagaggatactagagcttatg
aatgttgagaagcttacaagagaaaatgttgcaagccatctacagaaatataggctttac
ttgagaagattgagtgctgcagcaagtcgacaggttaacatggtcgctgcttttggaggt
agggactcctatataagttcattggacgactttgggacctttcagactttgggcgcttca
ggaaagttacaagccattagatcactccaatccagcgaagtgcttgttaatgcaaataca
agtggcttgggacttcatgatcgtttctcttccagtataattcaagttgggaatagcaac
acaaacattcctcccgctgatataagcagactccaaccaataattcttcctagcaatcaa
tatggtaggttggtgcagggagttcccacctcgttggaacttcagcaattgcaactaaaa
agaattcacaaaccaatcagtcattttcctggttccttatctggaagtagaatttctatt
cccaacaattcttttagcaatgtggccaacagtgatttcatagcacaatcacctgagcgg
cagacaccttcccgcacattggccaatctctcttcaagtacatcgttgtccacaagtctt
gatccttcccttgttagtgttgggttttcttctgaattgcctgatgctagtagatgcaaa
gctgatttgcaatctgctgttccgctaaccccatatacaaccagtactccttcaatagtt
tcctttactaataatgagaatttgcccaatttcttagacaattttcccgttgcccaaaga
ggcagcagttctcaaagcatttcttccactagtaccatagtgtcaccttcacaggatcct
tttataggaaaagatgcaaaatgtcacaagagctcttctggtggaccatcaatgctattg
cttgcaactatggatgaagagaggaattatctcaatttcagcaatgcgagcaattctaaa
caaagagaaccaaaggaggaacacatatatgaacaagaagccctgttcaattctttctct
agtactgctaatttagtgactaattctgtttctggaaatcaaagagtgaacaacagtctc
cataatcctggctattcaatttgttcaccaagttgccagattgataaatcagacaaccac
agttcgcagaaagacaagttcaattgggagataatgaaagtgcagggaggatcagtctta
ttcgattgttttcttgacgatgcagttggttctctgatcaaaccggaaaaagatcatatc
agttttgctgagaacagtgaatctgacatgtatccgctcgatgcctgcttgtaa
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