Zingiber officinale (ginger): 122051297
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Entry
122051297 CDS
T08725
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5-like
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122051297
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122051297
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122051297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
FlxA
HrpB2
DUF713
Motif
Other DBs
NCBI-GeneID:
122051297
NCBI-ProteinID:
XP_042468289
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All DBs
Position
3A:20304788..20307589
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AA seq
320 aa
AA seq
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MMETAEEAEGSASKEEPQETREEMLSRHRQEIAKLHNKEMNLKKAAAKGSKAEQKAKKKQ
VEEEISRLQTQLKAKHDGELAAMGHETSDSADKDNLDILVKAIAGVNVAAHGDLAKPSKG
TRRRERRAQEEAAREQRIQEEQSNMISDRMIENEKLEKKLEPLGLTINEIKPDGHCLYRA
VENQLSLNLGSTSPYSFQELRKMAANYMRNHASDFLPFFLSESKIEVDSDSSLLERFEKY
CEEVESTAAWGGQLELGALTHCLKKHIVIYSGSFPDVEMGKEFKSEKGSGVSNTSIMLSY
HRHAYGLGEHYNSVVPITMC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacggctgaagaggcggagggaagcgcttccaaggaagaaccacaggagacc
cgcgaagagatgctctcgaggcatcggcaagagattgccaagctccataacaaggaaatg
aatcttaaaaaagctgctgctaaaggaagcaaagctgagcagaaagcaaaaaagaagcaa
gtggaagaagagatatctcgacttcaaactcaattaaaagctaaacatgatggagaactt
gcagcgatgggccacgagacaagtgacagtgctgacaaagacaatctagatattttagtc
aaggctattgctggtgttaatgtcgctgcccatggtgacttggcaaaacccagcaaagga
acaaggagaagagagagaagagcacaagaagaagccgcaagagagcagaggatacaagaa
gagcagagcaacatgattagcgatcgcatgattgaaaatgagaaactagagaagaagttg
gagccactgggtctgacaatcaacgagataaagccagatggccattgtctctatcgagca
gttgaaaaccagctctcactcaacttaggcagtacatcaccttacagtttccaggagctt
cgcaaaatggctgccaattacatgagaaaccatgcttctgattttctaccctttttccta
tcagagagtaaaattgaggtagattcagatagctcactcttggaaagattcgagaaatac
tgtgaagaagtcgagtcaacagcagcttggggaggacaactcgagcttggtgcccttact
cattgtctcaagaaacatatcgtcatatattccggttctttcccagatgtggagatgggg
aaagaattcaagtctgagaagggaagtggagtcagtaacacgagcataatgttatcgtat
catcgacatgcttatggcctcggcgagcactacaattcagtggttccgattacaatgtgt
taa
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