Zingiber officinale (ginger): 122051324
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Entry
122051324 CDS
T08725
Name
(RefSeq) chloride channel protein CLC-c-like
KO
K05016
chloride channel 7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122051324
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122051324
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122051324
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122051324
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122051324
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122051324
Ion channels [BR:
zof04040
]
Chloride channels
Chloride channel (CLC)
122051324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
122051324
NCBI-ProteinID:
XP_042468328
LinkDB
All DBs
Position
3A:complement(20609527..20612666)
Genome browser
AA seq
762 aa
AA seq
DB search
MERNSSSFYEDKETGAAEPLIRRRAVANTTSQSAIVGANICPIESLDYEIVENDLLKEDW
RSRNKVQIFQYVVLKWALALLIGLATGLVGFFNNLAVENIAGFKLLLTSNFMLKHRYHAA
FVVYAGCNLILAAATAALCAYVAPAAAGSGIPEVKAYLNGVDAHSILAPSTLFVKIFGSI
GGVAAGLMVGKEGPMVHTGSCIASILGQGGSRRYHLTWKWLRYFKNDRDRRDLITCGAAA
GVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFTTAVVAVVLRGLIGFCRSGRCGLFGQ
GGLIMFDLSATVATYGTPDLIAVVVIGAIGGLLGSFYNFSVDKILRNYSVINERGAPFKI
LLTVTISLLTSCCSYGLPWLAKCTPCPPGSQCPTIGRSGNFKSFQCPPNHYNDLASLFLN
TNDDAIRNLFSGGTEDEFYISSLLIFFAASFSLGIVTYGIAIPSGLFIPVIMAGASYGRL
LGTLLGPLSKLDKGLFSLLGAASFLGGTMRMTVSVCVILLELTNDLLMLPLVMLVLLVSK
TVADCFNKGIYDQIVKMKGFPYLECHPAPYMRNLDAGDAVSGPLITLAGVEKVANIVYTL
KLTGHNGFPVIDEPPFSEEPGLCGLVLRSHLLVLLKGKQFTKERVSTGAGHVLQRFGAFD
FAKAGSGKGVQLEDLDIDDEEMEMFVDLHPITNRSPYTVVESMPLSKAAVLFRDLGLRHL
CVVPKTPGRHPIVGILTRHDFMPEHILGLFPHLKHRRPHMSV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaactcgtcgagcttttacgaggacaaggagacaggagcggcggaacccttg
atcaggaggcgcgccgtcgccaacaccacctctcagagcgccatcgtcggcgccaacatc
tgccccatcgagagcttggactacgagatcgtggagaatgatttattgaaagaggattgg
agatctcgaaacaaggttcagattttccagtacgtagtgctcaagtgggcactggcgctc
cttataggcttggctactggattagtcggattcttcaacaacctcgccgtcgagaacatt
gctggattcaagttgttactcacgagcaacttcatgctcaagcataggtatcatgcagca
tttgtcgtctacgctggctgcaacttaattctggcagcagcgactgctgctctatgtgct
tatgttgctccggcagcagctgggtccggcatacctgaggtgaaagcttatctaaatggg
gtcgatgctcactccatcttggctcccagcacactgtttgtgaagatctttggttccata
gggggagttgctgctggactcatggtgggcaaggagggccctatggttcacacaggatca
tgcatagcttccatcctcggtcagggtggatcgcgcaggtatcacttgacttggaaatgg
cttagatatttcaagaacgaccgagatcgtagagatttgataacttgtggagctgctgcc
ggtgtagcagctgcctttagagcccccgtgggtggggttctttttgcactcgaagaagtc
gcatcatggtggcgaagtgctctcctctggaggacatttttcacgacggccgtagttgct
gtcgtattgaggggtctgataggtttctgccgcagtggaaggtgcgggctgtttggacaa
ggaggactgataatgttcgacctgagcgccactgtcgctacctacggaacgccggatctg
attgcggtggtagtcatcggagccataggtggacttttgggaagcttctacaacttctcc
gtcgacaagatacttcgcaactacagcgtcatcaatgaaagaggagctccattcaagatc
ctcctcacagttacgatctcgctcttgacctcgtgctgttcgtatggactgccatggctg
gccaaatgcaccccgtgccctccaggttctcagtgcccgaccatcggccggtcgggcaac
ttcaagagcttccaatgtccgccgaaccattacaacgacctcgcttccctctttctcaac
accaatgacgatgccatacgcaatcttttcagcggtggcactgaggatgagttctacatt
tcttctcttctcatcttcttcgctgcgagtttttccctcggcatcgtcacctatggcatc
gccattccttctggccttttcatccccgtcataatggctggggcttcgtacggtcgcctt
ttggggacccttctcggccctctgtctaaattggataaaggcctgttttcgctcctcggc
gcggcttcttttctcggcggaaccatgagaatgacagtctcagtttgcgttatcctcctg
gagctcaccaacgatcttctaatgctccccctggtgatgctcgttctcctcgtatccaaa
accgtcgcggattgcttcaacaagggaatatacgatcaaattgtgaagatgaagggcttc
ccctacctggaatgccaccctgcaccttacatgcgaaacttggacgccggcgacgcggtc
tcaggcccgctcattacccttgccggggtcgagaaggtggcaaacatagtttacactttg
aaattgaccggccataatggatttccagtaatcgacgagccgcctttttcggaagaacca
ggactgtgtggtctcgtattgcggtctcatctgctcgtattgctcaaagggaagcaattc
accaaggaaagggtgtccactggcgcaggacatgttttgcagagatttggcgcgtttgat
ttcgccaaagcagggtctggtaagggtgtgcagttggaggaccttgacatcgacgacgaa
gaaatggaaatgtttgtggatctccatcccattaccaatagatcgccttacacagtggta
gagagcatgcccctatccaaggctgcagttctattcagagaccttggcctccggcacctg
tgcgtcgtgcccaagactccggggaggcatcccatcgtagggattctaacgcggcatgat
ttcatgccggagcacatcctcgggctgtttcctcatctcaaacatcgccgtcctcatatg
agcgtttga
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