Zingiber officinale (ginger): 122051350
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Entry
122051350 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122051350
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122051350
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122051350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-rbx1
RING_XB3-XBAT31
DZR_2
Zn_ribbon_6
zf-C3HC4_4
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122051350
NCBI-ProteinID:
XP_042468385
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All DBs
Position
3A:20998713..21003901
Genome browser
AA seq
209 aa
AA seq
DB search
MVLHLDLNSLPVESHPSEGTSAVYNPCHATGPQQGSCTQPIPLIDADELEDEVVALSSSI
DFSTGRSRTKRTRPVIVILDDDLELNMRNSVIVGEQVASSSLFACKRPFRSSNSRTSIDR
DPYIDLEDGHDAKRKRLMSPEPEPQPAKVIVKPYTCLICMEELVEAASTICGHIFCMTCT
KTSIRTQKKCPTCRRKLNMRNFHRVYLPH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcatctagacctcaactcccttccagtagagagccatccctcagaggggact
tccgctgtttataacccctgccatgctactggaccacaacaaggatcttgcacccaacca
attcctttgattgatgcggatgaattagaggatgaagttgttgctctttcgtcatcaata
gatttttccacggggaggagtcgtaccaaaaggacccgaccagtgatagtgatattagat
gatgatctggagttaaatatgagaaattcagtcattgtaggggaacaagttgcaagctca
tccttgtttgcttgcaagagaccatttagaagttctaatagcaggacaagtattgacagg
gatccttacatcgatttagaggatggacatgatgctaagaggaagagattgatgtcccct
gagcctgagcctcagcctgcaaaagtaatcgtgaagccctacacttgcctgatctgcatg
gaggagttggtcgaagcggcgtcgactatttgtgggcatattttctgcatgacctgcacg
aagacctccattcggacacagaagaagtgcccaacttgcaggaggaaacttaacatgaga
aatttccaccgtgtttaccttcctcattaa
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integrated database retrieval system
