KEGG   Zingiber officinale (ginger): 122051380
Entry
122051380         CDS       T08725                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122051380
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122051380
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 122051380
NCBI-ProteinID: XP_042468431
LinkDB
Position
3A:21610922..21618146
AA seq 587 aa
MAPETSRSGASADSYIGSLISLTSKSEIRYEGILYSINTEESSIGLRNVRSFGTEGRKKD
GPQIPPSDKIYEYILFRGTDIKDLQVKSSPPAQPTTINNDPAIIQTHYPHPVSTSTSLPT
AGSGGTTTDVTSHSAQLGLPRPTFQGGLPPYQPSGGLGTWGSSPAPPTANGSGLGMPPMY
WQGYYAPSSGLPQLQQTTLLRPPPGLPLPHSMQHPFQYPGINPSLPSGAQSFPELPPLFP
QANSNPALTSSPLPLTLDLSSTSSLSMETSSTLLQNKAPVTTLAASTFGISLPLASPSIS
NFEKVIPSTTSAFSSNPIIGHGSTLPYLSISQAEPPTTVSSSSSQVEKAVALVTPDKLLP
LVTSVLPSSQPLQTGKIDADVKVGDEKAKLLLSEPTLGAPAETKEPILPLPKSNLHKANG
ATSHNFYNRGRGRGQGNVPRHVTKFTEDFDFTAMNEKFNKDEVWGNLGKNKTHLKDNDGV
FQEDETYDTLEEDDDTLNKITSKPVYVKDDFFDTLSCTTLDRGTRGGRTRFSEQLKIDTE
TFGDFTRLRPGRSGGRGFRGGGRRGSYYGGGYGYNRGRGYGYSHRAS
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggcaccggaaacctccagatcgggggcgtcggcggactcctacataggaagcctcata
agcttgacctccaagagcgagatcagatacgagggcatcctctacagcatcaacaccgag
gaatccagcataggcttgcgcaacgtacgctcttttggaactgaaggtcgaaagaaggat
gggccacaaattcctcctagtgataagatatatgagtacatactgttccggggaactgac
attaaggacttgcaagttaagtcctctccaccagctcagccaactaccataaacaatgat
cctgctataattcagacacattatcctcatcctgtatctacctctacaagtctgcctact
gctggaagtggaggtacaacaacagatgttacttcccattcggctcagttgggacttcct
aggccaacgtttcagggcggtttacctccttaccagccaagtggaggcttagggacttgg
ggttcttcacccgccccaccaactgcaaatggttctgggcttggaatgccaccaatgtat
tggcaaggatattatgccccgtctagtgggctgccacagttgcaacagacaacattgctc
agaccgccaccaggattgcctctgcctcattcaatgcagcacccttttcaatatcccgga
ataaatccttctttaccatctggagctcaaagttttcctgagcttcctcctctgtttcca
caagccaactcaaacccagctctgacatctagtcctttgccattgacattggatctttca
tcaacaagctcattatctatggaaacgtcatccactcttttgcaaaataaggctcctgta
acaactctcgctgcatcaacttttggcattagtcttcctctggcctcaccatccatttcc
aattttgagaaagttatcccttcaactacatctgcttttagctccaaccctatcatcgga
catggttctaccttgccatatttatccatttcacaggcagaaccccctaccactgtttca
tcaagttctagtcaagttgaaaaagcagtagccttagtgactccagataagctgttgccg
cttgtcacctctgtgcttccatcatctcagccattgcagacaggtaaaatagatgctgat
gttaaagtgggtgatgagaaagctaaactattgctttctgaaccaacacttggtgcacct
gcagaaaccaaggagccaatattgccactgccaaaatctaacttgcacaaggctaatggg
gctacctcacacaatttctacaatagagggcgtggaagagggcaaggaaacgttccacgc
catgtgacaaaatttactgaagactttgacttcacagcaatgaacgaaaagttcaacaaa
gatgaagtttggggcaaccttggtaaaaataaaacccatttgaaggataatgatggagtg
tttcaagaagatgaaacttatgatactctggaagaagacgatgatactctaaataagatc
acgtccaagcctgtgtacgtaaaggatgatttctttgatactctttcttgcaccactctt
gatcgtggaactcggggtgggagaacaagattttcggagcagttgaaaatagacacagag
acttttggggattttacaagactacggccaggtcgcagtggcggacgtggcttccgtggc
ggaggacgtcgaggatcctactacggaggtggctatggatacaatagaggccgtggttat
ggttactcacatcgtgcttcctag

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