KEGG   Zingiber officinale (ginger): 122051567
Entry
122051567         CDS       T08725                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zof04812]
    122051567
Cytoskeleton proteins [BR:zof04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     122051567
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_DCAF4 eIF2A Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 122051567
NCBI-ProteinID: XP_042468693
LinkDB
Position
3A:27657933..27676484
AA seq 833 aa
MALNRGYKLQEIVAHASDVKCVSIGKKSNRIFVTGGEDRKVNLWAIGKPNPLLSLSGHMN
SVESVVFDSAEVLVLGGSSNGIIKLWDLEEAKIIRTLTGHRSNCTSVEFHPFGEFFASGS
LDADLRIWDIRKKGCIHTYKGHTGGIRKIRFTPDGRWVVTGGADNVVKLWDLTAGKLLHD
FKFHNGPIRCIDFHPHEFLLATGSADRTVNFWDLETFELIGSAGPEVTRVCSMIFHPDGK
SLFCGLDAALKVFSWEPIRCHDAVDMGWSTLADLSVYEGKLLGCSYHENCIGLWLADISL
IAPYALGVVPKVNVTVEPTYVQGEIHSLELTDISKKSNTTPTSEYQEIGVKTKETKKGSF
LTSDDFLPSITPVSNSDYASTTPSVILSRVIRDKTSSGGITGPQKIDSRITSEASIRSAA
TSKVVRGSLNSSNRSSQILPSKSTMLTSISTSAKEISLVNAKQRPMVQASLGTHSPVSMS
VVVPRDNRDLDSFKVKNITPETISHNLRLNRPAHKHKPSFASGDSKGQLVEKASVNMSER
CDSDINLRLFSGVAGNHDAAETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCS
SSETKSVTYVRGVAVQLGKTRTLVECWEKRERSSSGNRKGLLLHDEQKESEQSSERHLSI
SEVDFSPETFVQNHDAFVNSLKSRLMKLQMVKHFWEQNGIKGAIGAMAKLLDYSVQIDVI
NILKEKIDLFTLDLFSLLLPLFVSLLSSNIERHIIVALSLLLELVKSFKPVITSTITASS
TVGVDIQAEQRLERCIHCFNHLEKIKQLLPPLIRRGRGVAKHAGELNIVLHSS
NT seq 2502 nt   +upstreamnt  +downstreamnt
atggcgttgaatcgcggctacaagctccaggagattgtagcacacgcttctgatgtgaag
tgtgtgtcaattgggaagaaatcgaacagaatttttgtcacgggtggtgaagatcgcaaa
gttaacctatgggcaattggtaagccaaatccactattgagtctatcaggccatatgaat
tctgtagagtcagtggtgtttgactcagcagaggtcttggttcttggaggatcatcaaat
ggcataattaagctttgggatctggaagaggcaaagattattcggacacttactgggcac
agatcaaattgcacttctgttgaattccatccatttggtgaattctttgcttctggttct
ttggatgctgatcttaggatatgggatattagaaagaagggatgcattcatacttacaag
ggccacactgggggaattagaaaaattagatttacaccagatggacgatgggttgttaca
ggaggagcagataacgtggtgaagctgtgggatttaacagcaggaaagcttctgcatgat
tttaagttccataatggaccaattaggtgtattgatttccatcctcatgagtttctactt
gcaacaggttctgctgatcgaactgtgaacttctgggacctagagacctttgaattaata
ggctctgcagggcctgaggttaccagggtatgctcaatgatctttcacccagatggaaaa
tctctcttctgtgggttggatgcagccttaaaggttttctcttgggaaccaataagatgc
catgatgctgttgatatggggtggtccactttggctgatctcagtgtttatgaaggaaaa
cttttaggatgttcctaccatgaaaattgcattggactttggctagctgatatatcactc
attgctccatatgctcttggagtggttccaaaagtaaatgtgactgttgaacctacttat
gttcaaggagaaatccattccctggaattgaccgatatcagcaagaaatctaatacaaca
cctacctctgagtatcaagaaattggagttaaaactaaggagaccaaaaaaggatcattc
ttaacctctgatgattttctgccaagtataacacctgtatctaattcagattatgcatcc
actaccccatcagtgattttgagtagagttataagggataaaacctcttccggtggcatc
actggtccacaaaaaattgattctaggattacttcggaagcatcaatcagaagtgctgcc
acatccaaagttgtacgaggttctcttaattcctcaaatagaagttcacaaattttgcct
tcaaagagtactatgttgacttctatttctactagtgcaaaagaaattagtttggttaat
gcaaagcaacgcccgatggtgcaagcatctttgggaacacattctccagtgtccatgtcg
gttgttgtacctagagacaacagagatctggacagtttcaaagttaaaaacatcactcct
gagacaatttcccataatttaagattgaacagacctgctcataagcataagccatcattt
gcttctggagatagcaagggccaactggtagagaaagcatctgtgaacatgagtgagaga
tgtgattcagatattaatttaagactgttctctggtgttgctgggaaccatgatgctgca
gaaactgataaaagagaacatgacaaaaccagagacattgccagagattttgaaagagta
gtatcactagagcagcctgtacactctcagaatgaccattgtgaggagttgacatgctcg
agcagtgaaacaaaatcagtgacatatgttaggggagttgctgttcaacttgggaagacg
cggactctagttgaatgctgggagaaaagagagagatctagtagtgggaacaggaaagga
ttgctgctacatgacgaacagaaagaatcagagcagagttctgaaagacacttgtcaata
tcagaagttgatttcagtccagagacattcgttcaaaatcatgatgcatttgtaaattct
ttgaaatctcgcctaatgaagttacagatggtgaaacatttttgggaacaaaacggcatt
aaaggtgcaataggtgcaatggccaagttgcttgactattctgtccagattgatgtgatc
aacattctcaaggagaaaattgatctttttacccttgatctattctcactcttgttgcct
ctttttgttagtttacttagcagcaacattgagaggcatattattgttgccttgagtctg
ctgttagagctcgttaagtcattcaaaccagttattacttcaacaataaccgcatcttca
actgtgggggttgatattcaagcagaacagaggctggagcgttgcatccattgtttcaac
catttggaaaagataaagcaacttcttcctccattaattaggagaggaaggggagtagca
aagcatgctggagaactcaacatagttttacacagctcatga

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