Zingiber officinale (ginger): 122051782
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Entry
122051782 CDS
T08725
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122051782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122051782
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Others
AP-1 complex
122051782
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
HEAT_GCN1
Cnd1
Motif
Other DBs
NCBI-GeneID:
122051782
NCBI-ProteinID:
XP_042468999
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All DBs
Position
3A:complement(40006563..40025965)
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AA seq
861 aa
AA seq
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MNPFTSPSRLRDLIRAARACKTAAEERAVVRKECAAIRSSINENDQFFRHRNLAKLMFIH
MLGYPTHFGQMECLKLIAAVGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHLNHY
IVGLALCALGNICSAEMARDLEPEVQRLFLSRDLDIKKKAALCSIRIIRKVPDLAENLMI
PAASLLKEKHHGVLISAVQLCITLCKVSDIPLEHLRKSCIKGLVQILKELSNSSYTPEYE
IAGVMDPFLQIRILKLMRLLGQGDVECSEYMTDILAQVATRTESHKNAGNAILYECVETI
MGIEATSGLRVLAINILGKFLSNRDNNIRYVALNMLMKAVSVDSQAVQRHKTTILECMKD
SDISIRKRTLELVFLLVNETNVKPLTRELIGYLEVSDQDFKGDLTAKICSIVKKFSQEKK
WYIDQMFKVLCIAGNYVKDDVLHSLIITISNALDIQGYCVRSLYKALQNHPDQGGLVQVA
VWCIGEYGELLVNNIKVSEVENTMNVTDSHAVDVIEASLKHHLSDITIQSMCLVALLKLS
SRFTSTSERIREIIIHHKGSVVLELQQRAIEFNCIIQRHQNIKSSLLERMPALDESSYIG
KRTSSSQVNISAVKLTRPTPVASPSLPNGVAHAPTNPLLDLLDLIPDDNPVPTSSTNDIV
QDLLGIGLGNPLTSGTIAPSVGTDILLDLLSIGGTNDQNDVPVLDVSSKQGSEPLTNPST
FEVMDLLDGTTKDRSTDDEHPVYPSIIAFQSGTLKVAFAFTKRPDKPQITQIQVTCTNLS
TDEYMDFIFLAAVPKFIQLQLEPASSNILPANSDGAITQTLTLTNSQHGQKPLAMRMRMT
YKVNNQDKLEQGQVNNFPPEL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgtttacctcgccatcgcggttgagggatctgattcgagctgcacgtgcttgc
aaaactgcagcagaagagcgtgcagttgtcagaaaggaatgtgctgctatacgttcttca
atcaatgaaaatgaccaattttttaggcaccgtaatcttgctaaacttatgtttattcac
atgcttggctatcctactcatttcggtcaaatggagtgtctcaaactgattgctgctgtt
ggctttcctgagaaacggattggctatttgggccttatgctgcttctggatgaaagacag
gaagtacttatgctagttacaaattccttgaaacaagatctcaatcacttgaatcattat
attgtgggtcttgctctttgtgctttagggaacatatgttctgcagaaatggcaagggat
cttgaaccagaagtgcaaaggctctttttaagtagagacctagatataaaaaaaaaggct
gccttgtgctctatcaggataataagaaaagttccagatttggcagaaaacttaatgatt
cctgctgcttctctgttgaaagaaaaacatcatggagtcttgatatcagctgttcagctt
tgtatcactttatgtaaagtcagtgatattccccttgagcatttgaggaagagctgcata
aagggtttggttcaaattttgaaggaactgtccaacagttcatatacacctgagtatgag
attgctggggttatggaccctttcttgcaaatccgaattcttaagttgatgcgcttgttg
ggccaaggagatgttgaatgtagtgaatatatgaccgacattcttgctcaggttgcaaca
agaactgaatcacacaaaaatgctggaaatgctattttatatgaatgcgtcgaaacaata
atgggtatagaagctactagtggtttacgtgtccttgcaatcaatattctgggcaaattc
ttgtcaaatcgtgacaacaatatcagatatgttgcactcaacatgctcatgaaggcagtc
agtgtagactcacaagcagtgcagaggcacaaaacaacaatccttgaatgcatgaaggat
tctgatatctccattcgaaagaggactctggagcttgtttttcttctagtcaatgagaca
aatgtgaaacctttgacaagggaacttattggttatctagaagtgagtgatcaagatttt
aagggtgatctaactgccaaaatttgttcaattgttaagaagttctcacaggagaagaaa
tggtatattgaccagatgttcaaggttttatgtattgctgggaattatgttaaagatgat
gtattgcatagtctcataattacaataagtaatgcccttgatatacaaggctattgtgtc
agatcactatacaaggcactccaaaatcatcctgatcagggaggtttagtgcaagtagca
gtatggtgcattggtgaatatggtgagttgttggttaataacataaaggtgtctgaagtg
gagaatacaatgaatgtaacagattctcatgctgttgatgttatagaggcttctttaaaa
caccacttatcagatattaccattcagtcaatgtgtttggttgctcttttgaagctgtca
tctcgttttacatcaacctcagagaggataagagagataattattcatcacaagggaagt
gttgtgcttgaattacagcaaagagcaattgaattcaactgtataatccagaggcatcag
aatatcaaatcttctttgcttgaacggatgcctgctttggatgagtcttcttacattgga
aaaagaactagttcttcacaagtgaatatttctgcagttaaacttacccgaccaactcct
gtagcgtcaccaagccttccaaatggtgttgcccatgcaccaacaaatcccttactggat
ttacttgatttaataccagatgataacccagttcctacttcatccaccaatgatattgtg
caggatttgttaggcattggcttgggaaaccctttgacctcaggtaccatcgcaccatca
gtcggtacagatattctgctggatcttctttcaattggaggaactaatgatcaaaatgat
gtgccagtattggatgtctcctccaaacaaggatctgaaccactaaccaatccatccact
tttgaagtaatggatttgttggatgggactacaaaggatagatcaactgatgatgaacat
ccagtttatccatcaattatcgctttccagagtggcaccttgaaggttgctttcgccttt
acaaagagacctgacaaaccacaaattacacaaatccaagttacgtgtacaaacttatct
acagacgaatatatggatttcatttttctagcagctgtccctaagtttattcagctacag
ttagaacctgccagcagcaatattcttccagccaacagtgatggggcaatcactcaaact
ctaactctaactaattcccaacacggacagaaacctttggccatgcgtatgaggatgact
tacaaagtaaacaaccaagataagctagaacaaggacaagtcaacaacttccctcctgaa
ttatga
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