Zingiber officinale (ginger): 122051850
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Entry
122051850 CDS
T08725
Name
(RefSeq) autophagy-related protein 18d-like
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122051850
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122051850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
BCAS3_WD40
WD40
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_RSE1_2nd
NBCH_WD40
VPS11_N
Motif
Other DBs
NCBI-GeneID:
122051850
NCBI-ProteinID:
XP_042469086
LinkDB
All DBs
Position
3A:complement(47432906..47443451)
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AA seq
416 aa
AA seq
DB search
MSSTISTRNINPPMRIASLEPSQPWLSSATSQMDPTDSDDSNQSELLSVTWNQDYGCFSV
GTSNGFRIYNCNTFKETFRRDLKSGGFGIVEMFFRSNILALVGSGSNTQYPPNKVVIWDD
HQSRCIGEFTYRSDVRGVKLRRDRIVIVLEHKIYVYDFTDLKLLHQIETLSNPKGLCCLS
HHSSTSVLAYPGLHRGDVRVEHFGLKMTKSFSAHDSQISCMTLTLDGLLLATASTKGTLI
RIFNTMDGTQLQEVRRGLDRAEIYSIALSPNVQWLVVSSDKGTIHVFSLRVRVAGEDAST
QLAYAQAPGIAHQNSSSSLNALVSTNTGTNTNSSLHFMRGVLPKYFSSEWSFAQFHLPEV
TRYIAAFGSQNSVMIVGMDGSFCRCSFDLVNGGQMLQEEYVRFLETDSRRLKSTSN
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaacaatttcaacaaggaacattaatccaccaatgaggattgcctcattggaa
ccatcacagccatggctatcttcagctactagtcaaatggacccaactgacagtgatgat
agtaatcaaagtgagctgctatcagtgacttggaatcaagactatggatgcttttcagtt
ggaacaagcaatggtttcaggatttataactgcaacactttcaaagaaacctttaggaga
gatttgaaaagtgggggctttggcattgttgaaatgttttttcgttccaatatcctagct
ctcgtaggcagtggttccaatacacaatatccacctaacaaagtagtgatctgggatgat
catcagagtcgttgcattggcgaatttacatatagatctgatgtccgaggagtgaaacta
agacgagatcgtattgtcatagttcttgagcataagatttatgtatatgatttcacagac
ctgaagctacttcatcaaatagagactctatctaatcctaaaggactttgttgtctctca
catcattccagcacctctgtgttggcataccctggtttgcatcggggagatgtccgagtt
gaacattttggtttgaagatgacaaaatcttttagtgctcatgattctcagatatcttgt
atgactcttaccttggatgggctacttctagccactgcaagcacaaaaggcacattgatc
agaatatttaacaccatggatggtacacaactgcaagaggtacgcagaggactagataga
gctgaaatatatagcattgccctttctccaaatgtacagtggctggttgtttcaagtgac
aaaggaactattcatgtgtttagtcttcgagttagagtggctggagaagatgcttccacc
caacttgcatatgctcaagctccaggaattgctcatcagaactcttctagtagtctcaat
gcccttgtatctacaaacactggaacgaataccaactcatcactgcatttcatgagaggt
gtcttgcctaagtatttcagttctgaatggtcttttgctcagtttcacttgccagaggtt
actcgttatattgctgcatttggatcacaaaactcggttatgattgttggcatggatggc
agcttctgtaggtgcagcttcgacttagtgaatggtggccagatgttacaggaggaatac
gtgcggtttttggaaactgattcccgccggctaaagtcaacatcaaactga
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