Zingiber officinale (ginger): 122051862
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Entry
122051862 CDS
T08725
Name
(RefSeq) DNA repair protein RAD51 homolog 2-like isoform X1
KO
K10869
RAD51-like protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122051862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zof03400
]
122051862
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
122051862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
AAA_25
ATPase
DnaB_C
RecA_N
AAA_22
NACHT
AAA_24
Motif
Other DBs
NCBI-GeneID:
122051862
NCBI-ProteinID:
XP_042469100
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All DBs
Position
3A:49001809..49028971
Genome browser
AA seq
372 aa
AA seq
DB search
MSNKLISQMGLPSSLANVFSARNILTAKDALSLPEFDLMALLDVDRDQVRTAVARISEIA
CPPCRTALSLMEDRALTGGYLPTRLLGLDRALRGGIPFGALTELVGPSGIGKTQFCLKLA
LLAALPSSYGGLNGRVIYMDTESKFHSTRLIEIGRSSFPHIFNSEGMAQEMAGRIIVLRP
ASLDELTESLQQIQLIILQHDVKLLIVDSMAAILVGENERSTTGQKQHSCHLPLSFLKSL
AEFSQIPIVVTNQVRSQNNYEVVHYPFQGNTDRTSCMLEKLESHLIASLGIQWAHAVTIR
LIFEAHSGQRFIKISKSPTSPAIAFPFLVKSSGIALLSDEGLEVTGSEMSTIRCEGLNVL
VEGAEPFPHLGC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaaactcatcagccagatgggtcttccctcttccctagcgaacgtcttctcg
gctcgaaacatcttaaccgccaaggacgccctctcactgccggagttcgacctgatggcg
cttctggacgtcgatcgcgaccaggtcaggaccgctgtcgcacgcataagcgaaatcgcc
tgccctccctgccgaacggctctatcgctcatggaggaccgcgcgctgaccgggggctac
ctccctacgcgtcttcttgggctcgaccgcgctcttcgcggcggaattccgtttggtgct
ctcacggagttggtcggtccatcaggaattggcaagacccagttttgcttaaagctggct
ctgttggcagccttgccatctagctatggaggattaaatggccgagtaatttatatggat
actgaatctaaatttcattctaccaggttgatagaaattggtagaagtagttttcctcac
atatttaattcagagggaatggctcaagagatggctggaaggatcatagttttgcgacct
gcatcattagatgaattgactgagagtttgcaacagattcagctgattattctccaacat
gatgtaaagttgttgattgttgatagcatggctgcaattcttgtgggagagaatgaaagg
agcacaactggacagaagcaacattcatgccatttgccactttcatttctcaagtccctt
gctgaattttcacaaattcctattgtggtgacaaaccaggtgcggagtcagaataattat
gaagttgttcactatccattccaaggtaatacggataggacaagctgcatgcttgaaaag
ctagagtctcacttaattgcttctttagggatccaatgggctcatgctgtaaccatccgt
ctcatatttgaggctcactctggtcagaggtttattaagatttcaaaatctcccacatcc
ccggcaatagcatttccgttccttgtgaagtcctctggaattgcattgctaagtgatgaa
ggtctagaagttacaggctcggagatgagcacaatacgatgtgaaggcctaaacgttctt
gttgagggagctgaaccattccctcatcttggatgctaa
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