Zingiber officinale (ginger): 122052031
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Entry
122052031 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122052031
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052031
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122052031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
122052031
NCBI-ProteinID:
XP_042469348
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Position
1B:complement(18688165..18698513)
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AA seq
583 aa
AA seq
DB search
MIGTPNLYPVVGVEETGSSQPLESSEAIGHMISRVNQPGMEDFSSSLSEVSNRMEGSNNN
FSSLKAEKSCTSELVQSPHHRIDTIEETGEWKSNKYFYDNSPLIRGNNDISAPQSEKSST
SELVQSSNHRIDTNEDTVEQKSGKYFYYDSPLYEDTGFWIPVSVPPMLESDPDEWSCGFG
ANGGYFPEEEFNWDQFLGEDKEMTMWDVVSEMFLVARGKVSALSSGNLLSHRMSWISTDI
LEETWKEMANTLAEANFGNSMEILETEPPKWLSDSAAAACMLCNIRFHPIMCSRHHCRFC
GGIFCNDCSKGRSLLPRKFRDANPQRVCDVCCVRLESVQPYLMNQISHASQLPTHDMTDL
STLRSWLNFPWGRTMEYEIYKGANIIHSYCKVGLLKPEKLIPDVILKQAKGLAILTVVNV
GIMVTYKVGTGLVLSRREDGTWSPPSAISSFGIGWGAQAGGELTDYIIVLRNEAAIKTFS
SNGHLSIGAGLSAAAGIFGRAAEADIRAGDGGIAACYTYSCSKGAFVGCALNGSMVTTRV
SENSRFYGAPIKASKILLGSMPRPPAAAILYRALSELFIKLES
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggactcctaatctttaccctgtagttggagtcgaggaaacggggtcatcccaa
cctctggagtcgtcagaagccatcggtcatatgatctcccgtgtgaatcaaccagggatg
gaggatttttcgtcttcgttgtctgaggtatctaatcgaatggagggaagcaacaacaat
ttctcttcgcttaaggctgaaaaatcttgcacttcagagttggttcaatctcctcaccac
agaattgacactattgaagagacaggcgaatggaaatcgaacaaatatttctatgataat
tctccacttataagaggcaacaatgatatatctgctcctcagagtgaaaaatctagcact
tcagaattggtccaatcttctaatcacagaatagacaccaatgaagacacggtagaacag
aagtcaggcaaatatttctattatgattctccactttatgaagatactggattttggata
cctgtgtctgtccctcccatgctagaaagtgaccctgatgaatggagttgtggatttggt
gctaatggtgggtactttcctgaggaagaattcaattgggaccaatttttaggagaagat
aaggagatgaccatgtgggatgtggtttctgagatgtttcttgtggcacgaggcaaagta
agtgccctaagttcaggtaatctactaagccatagaatgtcttggatatcaacagatatc
ttagaagaaacttggaaagagatggccaacactctggcggaggctaactttgggaacagt
atggagattctggaaacagagccaccaaagtggttatctgacagtgctgctgcagcttgc
atgctctgcaacataagatttcacccaattatgtgctcaaggcatcattgccgattttgt
ggtggcatattttgcaatgattgctcgaaaggaagaagcttgctacctcgaaagttcaga
gatgcaaacccacaacgagtgtgtgatgtttgttgtgtgcgattggagtctgtgcaacct
tatttaatgaatcaaatcagccacgcctcccagcttccaacccatgacatgactgacctc
agtaccttgcgatcatggttgaattttccatggggtcggactatggagtatgagatttac
aaaggagcaaatataattcactcttattgtaaggttggtttgctgaaacctgagaagtta
atcccagatgttattttgaagcaagcaaaaggccttgcaatcctaactgttgtcaatgtt
ggtataatggttacttacaaagttgggactgggcttgtgctctctcgaagagaagatggc
acttggtctccaccctcggccatttcttcatttggtattggatggggggcccaggctgga
ggcgagctcactgactacataattgtattgaggaatgaagctgccatcaaaacctttagc
agcaatgggcatttgtccattggtgcaggattgagtgcagctgctggaatttttggacgg
gctgcagaggctgacatacgtgcaggtgatggcggtatcgctgcttgttatacatacagc
tgcagtaaaggtgcatttgttggttgtgcactcaatgggagcatggtcactactcgtgta
tccgaaaactcacgtttctacggcgcacctatcaaagcatccaagatacttcttgggtcg
atgccaaggcccccagctgcagctattctctaccgtgccctttctgagctattcattaag
ctggaaagttag
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