Zingiber officinale (ginger): 122052163
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Entry
122052163 CDS
T08725
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122052163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122052163
03016 Transfer RNA biogenesis [BR:
zof03016
]
122052163
03012 Translation factors [BR:
zof03012
]
122052163
04131 Membrane trafficking [BR:
zof04131
]
122052163
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122052163
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122052163
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122052163
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
122052163
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122052163
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122052163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
122052163
NCBI-ProteinID:
XP_042469499
LinkDB
All DBs
Position
3A:complement(99697755..99701138)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLVNEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFIKMIPTKQMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaaggttcatataagcattgtggtcattggccatgtcgattctggtaaa
tcgaccaccactggtcatctcatttacaagcttggaggcattgacaagcgtgtaattgag
aggtttgagaaagaagcagctgagatgaataaaagatctttcaaatatgcttgggttctt
gacaagcttaaggctgagcgtgagcgtggtatcaccattgatattgctctttggaagttc
gagaccacaaagtactactgcactgtcattgatgcacctgggcaccgtgactttatcaag
aacatgatcactggaacctctcaggctgattgtgcagttctcattattgattcaaccact
ggtggttttgaggcaggtatttcaaaggatggccaaacacgagaacatgctcttcttgct
ttcactcttggtgttaaacagatgatttgctgctgcaacaagatggatgccactacccca
aagtactccaaggctcgatatgatgaaatcgttaaggaggtctcttcttacctcaagaaa
gttggttataatcctgacaagatcccattcgttcccatttctggtttcgaaggcgataac
atgattgagaggtcgaccaacttggactggtacaagggtccaacccttctcgaggccctt
gacttggttaatgagccaaagaggcctacggacaaaccccttcgccttccactacaggat
gtctacaagatcggaggcattgggactgttccagtagggcgtgtggagactggtgtcctc
aagcctggtatggttgtcactttcggtccaaccggtctcaccactgaagtcaagtctgtg
gaaatgcaccatgaggctctacaagaggctcttcctggcgacaatgttgggttcaatgtt
aagaacgttgcagtcaaggatctcaagcgaggctttgttgcttccaactccaaggatgat
cctgcaaaggaggcagctaattttacatctcaggtcatcatcatgaaccaccctggccag
attggcaatggatatgcccccgtcctcgattgccacacctcccatatagctgtcaagttt
gctgaaattcttaccaagattgacaggcgctccggcaaggaactcgagaaggagcccaag
ttcctcaagaacggtgatgctggattcatcaagatgattcccaccaaacaaatggtagtt
gagaccttctctgagtacccgcctctcggtcgttttgctgtgagggacatgagacagact
gtggctgtcggtgtcatcaagagtgtcgagaagaaggatccaaccggtgccaaggtcaca
aaggcagccgccaagaagaaatga
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integrated database retrieval system
