KEGG   Zingiber officinale (ginger): 122052216
Entry
122052216         CDS       T08725                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122052216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122052216
   03041 Spliceosome [BR:zof03041]
    122052216
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122052216
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122052216
Spliceosome [BR:zof03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122052216
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 OB_RNB
Other DBs
NCBI-GeneID: 122052216
NCBI-ProteinID: XP_042469573
LinkDB
Position
3A:104694381..104704421
AA seq 376 aa
MELAEGNEKTVGGEFECEYDVEEIEEEVEEYEEEEEVEEEEEEMGGGGLDRSAGEGEGVG
IGDRREDSPRKRSENVDNGEEEMKQADAATSSAGKIFVGGVAWDTTEETFSRHFSKYGEI
TDSVIMKDKNTLMPRGFGFVTFADPSIIDKVLENEHVIDGRTVEVKRTVPREEMPSKAGI
KTKKIFVGGIPTSLTEDELKEHFSSYGEVVERQIMFDHATGRSRGFGFVTFKDEESVDKI
ISKGKMHDFDGKQVEIKRAEPKRSSGNQRKNERASYDAHSRSGSGYRANSYGYGGGQYDM
YYGGGSAGYGYGRGYGYGGVQSYGGGYGANYGGYMYGGGGFNGGNMYGGPSGYGGWYGGY
GNGRGGYGSRYHPYTK
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggagctcgccgaggggaacgagaagacggtcggcggcgagttcgagtgcgagtacgat
gttgaggagattgaggaggaggtcgaggaatatgaagaagaagaagaagtggaggaagaa
gaagaagaaatgggaggcggaggcctcgatcgtagcgcaggggaaggagaaggtgttgga
attggagatagaagagaagactcaccgcgtaagagatcggaaaatgtggataacggtgaa
gaggagatgaagcaagctgatgctgctacctcttcagcaggaaaaatctttgtcggtggt
gttgcttgggacactacggaagaaacattcagtaggcatttcagcaagtatggcgagatc
actgattcggtcataatgaaggacaagaacacccttatgccaagaggttttgggtttgtc
acatttgctgatccgtctattatagacaaggttttggaaaatgagcatgtcatagatggg
agaactgtggaagttaaaagaacagttccaagggaagaaatgccttcaaaagcaggaatc
aagacgaagaaaatctttgtgggagggatacccacatctctaactgaagatgagcttaag
gagcacttctcctcatatggtgaagtagttgagcgccaaataatgtttgaccatgctact
ggccgatcaagaggttttggttttgtcaccttcaaagatgaggaatctgttgataaaatt
atttccaaaggcaagatgcatgatttcgacggaaagcaagttgaaatcaagagggctgaa
ccaaagaggtccagtggcaatcagagaaagaacgagagggctagttatgatgctcacagc
aggagtggcagtggataccgagcaaactcttatggttatggtggtggtcaatacgatatg
tattatggtggaggaagtgcaggctatggttatgggagaggctacggctacggtggcgtc
caaagttatggcggcggctatggagctaactatggtggctacatgtatggaggtggggga
ttcaacggcgggaatatgtacggtggcccaagcggatatggtgggtggtatggtggttac
ggcaatggccgaggaggttatgggagcaggtaccacccctacaccaaatga

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