Zingiber officinale (ginger): 122052260
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Entry
122052260 CDS
T08725
Name
(RefSeq) ras-related protein RABH1b-like
KO
K07893
Ras-related protein Rab-6A/C/D [EC:
3.6.5.2
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122052260
04031 GTP-binding proteins [BR:
zof04031
]
122052260
Enzymes [BR:
zof01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.2 small monomeric GTPase
122052260
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
122052260
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
122052260
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122052260
Exosomal proteins of bladder cancer cells
122052260
GTP-binding proteins [BR:
zof04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
122052260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
SRPRB
MMR_HSR1
FeoB_N
ATP_bind_1
TIR_2
FabMG
AAA_7
Glycolytic
Motif
Other DBs
NCBI-GeneID:
122052260
NCBI-ProteinID:
XP_042469639
LinkDB
All DBs
Position
3A:complement(109981508..109996220)
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AA seq
208 aa
AA seq
DB search
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
GNKTDLVDKRQVSIEEGEGNAQELGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
QDDMIDVNLKSVNTNSSQSQSQSGGCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtgtcggcactcgcaaagtacaagctggtgttcctgggggatcagtcggta
ggcaagacgagcatcatcactcggttcatgtacgataagttcgataacacgtaccaggct
acaattggaatagattttctatcaaaaactatgtatcttgaggaccgaacagtcaggctg
caactttgggacactgctgggcaggagagatttaggagcttgatccctagttatattcga
gactcttcagtcgctgtcattgtatatgatgtagcaagccgacaatccttcttaaatact
tcaaaatggattgaagaggttcgcacagagaggggaagtgatgttattattgtccttgtt
ggaaacaaaactgaccttgttgacaagaggcaagtgtcgatagaggaaggagaaggcaat
gcacaggaacttggtgtcatgtttattgaaacaagtgcaaaagctggtttcaatataaag
gctctgtttcggaaaattgctgctgccctacctgggatggaaactctttcttcaacgaaa
caagatgacatgattgatgtaaacctgaagtccgtaaatacaaattcatctcagtcacag
tcacagtctggaggatgtagttgttga
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integrated database retrieval system
