Zingiber officinale (ginger): 122052298
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Entry
122052298 CDS
T08725
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122052298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122052298
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122052298
mRNA degradation factors
5'-3' decay
Decapping complex
122052298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
122052298
NCBI-ProteinID:
XP_042469699
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All DBs
Position
1B:complement(20930770..20939330)
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AA seq
367 aa
AA seq
DB search
MTNGKLMPNLDQNSTKVLNLTVLQRIDPFVEEILITAAHVTLYEFSIELNQWSRKDVEGS
LFVVKRNTQPRFQFIVMNRRNTDNLVEDLLGDFEYEVQIPYLLYRNAAQEVNGIWFYNSP
DCEAVANLFSRILSAYSKVSPKSKLTSKSEFEELEVVPTSSVIEGPLEPITSVSAAAPDV
ADDAFVNFFSNATSTGNASDATVISQLYLAAPPVPVTTHAPSHATSVNLPVLPTVPSIPI
PSASSVPLMKPLDSLESGNGSGSHAMNLVKPSFFSPALSSALVMPPVSSAAPTAPPLYSP
VTLQQPYGTPLLQPFPPPTPSASLTPSQNIGPVITRDKVRDALLSLVQNNDFIDMVYREM
LNAHYSL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgggaagctgatgccaaatctcgatcagaacagtacgaaggtccttaatctc
actgttctccagcggatcgacccgttcgtagaggagatcctgattaccgccgctcatgtc
accctctacgagttcagcatcgagctcaaccagtggagccgtaaagacgttgaaggatcc
ctattcgtcgtcaagaggaacacacagcccagatttcaatttatcgtgatgaatagacgt
aacacagataatctagtcgaggatcttttgggagactttgagtatgaagttcagattccc
tatcttttataccgaaatgcagctcaagaagtaaatggcatatggttttataattcacct
gattgtgaagcagtggcaaatctctttagcaggatactaagtgcatattccaaagtgtca
ccaaagtctaagctaacttctaaaagtgagtttgaggagcttgaagttgtacctacttca
tccgtcattgaaggtcctcttgagccaataacatcagtttctgcagccgctcctgatgtt
gctgatgatgcatttgtgaactttttcagtaatgctacaagcaccggaaatgcatcagat
gcaacagtgatcagccagttatatcttgctgctccacctgttcctgtgactactcatgca
ccaagtcatgcaacaagtgtcaatctgcctgttttgccaaccgttccatcaattcccatt
ccctctgcttcatctgttcctctaatgaaacccctggatagtcttgaatctggaaatggg
agtggtagccatgctatgaatctggtgaaaccttcatttttctcacctgctttatcttct
gcactggtaatgcctccagtatcatccgctgctcctacagccccgcccctctattctcca
gttacactgcagcaaccatatggaactccactacttcagccctttcctccacctactcca
tctgcatcgcttactcctagtcaaaacattggaccagttatcacaagagacaaagttcgt
gatgcactattgagccttgttcaaaataacgattttattgatatggtttatcgggagatg
ctaaatgcgcattattcgttgtga
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integrated database retrieval system
