Zingiber officinale (ginger): 122052477
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Entry
122052477 CDS
T08725
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122052477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122052477
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122052477
Complex B
122052477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
122052477
NCBI-ProteinID:
XP_042469944
LinkDB
All DBs
Position
3A:133221752..133229417
Genome browser
AA seq
509 aa
AA seq
DB search
MGDYNDALNRNNPQARTKAQNRANVLQMKLIGQSHSTGLTANLLKLFEPRPPLEYKPPPE
KRRCPPYTGMAQFVSKFAEPTDPEYSPPIVEGESRVQRRARIRKLRLEDGARKVAEELEK
YDPSKDPNATGDPYKTLFVARLNYETTEHRIKREFETYGPIKRVRLVTDKETNKPRGYGF
VEYVHTRDMKTAYKQADGKKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRTGGEEFTQ
KHSVREHQQLASGQSRSEEPRARDDRLLDREKSRERGRDREREERPRERSHERAREPRED
RHHHHRDRDRNKERERDREKDRDRDREKDRGRDRDHDRDRARGRDKERNHGRDYDRERER
DRPRDRDRERERDYDQAGYEREGGGYIHDKDSEYGSQSKHGRERSGTRERNVEHDNGQEW
YEGLRNQYDEPKGQKHYDHPPPHDLAEQTERSKQRQDYYEHRSYDRLQPDYFQNQHGYAD
LDQREEGEAVGDDYGYHHSERSLSRERQG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggggactacaacgatgccctgaatcgcaacaatccccaggcccgcaccaaagctcag
aaccgagccaatgttctccagatgaagcttattgggcaaagtcattcaactggtcttact
gctaatctattgaagctttttgagccacgccctccgttggagtataaacctcctccagag
aaaaggagatgtcctccctacacagggatggcacaatttgttagcaagtttgctgagcca
actgatcctgaatattctccaccaattgttgagggtgaaagtcgggtccaaagaagagct
agaattcgaaaactacgccttgaggatggtgcaagaaaggttgctgaagagttggagaaa
tatgatccatctaaagatccaaatgctacgggtgatccatacaagacgctttttgttgcc
aggcttaactatgagacaactgaacaccggatcaagcgggagtttgaaacttatggacca
attaagagggtacgtttggttacagataaggaaacaaataaaccaagaggatatggcttt
gttgaatatgtgcatacacgtgacatgaaaactgcatacaagcaagctgatggaaagaag
cttgataacagacgagttcttgtggatgttgagcggggaagaactgtgccaaattggagg
cctcgaaggttgggtggtggacttggtacaactaggactggaggtgaagaatttacccag
aagcattctgtcagggaacatcaacaacttgcttcaggtcagtctagatcagaggagcca
agggcaagggatgatcggcttctggatcgggagaagtctcgtgaaagggggcgagatcgg
gagagagaagagagacctcgtgagcgttcccatgaaagggcccgggagcctagagaggat
aggcaccaccatcacagggaccgagatagaaacaaagaaagggagagagatagggaaaag
gatagagatagagatagggagaaagatcgtggtcgagaccgtgaccatgaccgtgatcga
gctcgtggtagggacaaggaaaggaaccatggtcgtgactatgaccgtgagcgtgaacgt
gatcgtccacgtgatagggatcgagaacgagaaagagactatgatcaagctggttatgaa
agagaaggtggtggttatattcatgacaaggattctgaatatggcagtcagtcaaagcat
ggcagggagaggtctggcacaagggagagaaatgttgaacatgacaatggccaagaatgg
tacgaaggattaagaaatcagtatgatgagccaaagggccagaaacactatgatcatcct
ccaccacatgaccttgcagaacagactgagcgatcaaagcaacgccaagattattatgag
cataggtcctacgatcggcttcagcctgattattttcaaaatcagcatgggtatgcagat
ctagatcaacgtgaggagggtgaggcagtaggagatgattatggataccatcattctgaa
aggtccctgtcaagggagcgacaaggttga
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