Zingiber officinale (ginger): 122052498
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Entry
122052498 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC7-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122052498
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122052498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
D1044-6_C
Motif
Other DBs
NCBI-GeneID:
122052498
NCBI-ProteinID:
XP_042469978
LinkDB
All DBs
Position
3A:135091066..135096332
Genome browser
AA seq
703 aa
AA seq
DB search
MDMTEEQEQQLQQNVILNESTMMDQLFDSILDGTDRFPNTLRTDVIMITSDIAEDSQNLG
KRKINHRHTTEQIQRLEEFFQEFPHPDDKQRKELGQELCLDPMQVKFWFQNKRTQIRNQL
EREENQRLKEENELLLSDNLKLKEALNSACCPNCGGLPSLGEISIDEQQLLAENSRLRDQ
IERVTAMVAKRTGAQLIPFQSAGVGAQPRSDSGSGSGSSKKNRPEFGKSAAIALAELAME
ELLTLAKLGEPMWVVGRDGLTEALNQAEYARAFKNGLGPKNVNLSTEATRATAIVAVPAE
TLVDMFMDVDKWIALFSSIVTGAAIVEVFSDGAAGSYDGTLQLITAELQVPTPLVPVREG
LFLRHCKQHEGGVWAVVDVSFEVRQNPMAKFRRRPSGFIIHQMPNDCSKVIWVEHVEVDG
GEVHDMYKGVVKSGLAFGAKRWLARMERQCEKLASLSNSTAYIGNAEGTKNILKLSERMV
MSFCSGVSGSLIHQWTEVTGAATNEVMIRSRKNNGDPGRPAGTVLGASTSIWLPITPKRV
FDFLSNLATRNQWDILLHGAMVYEAATVLNSQEEGNCVSLLAVGLPGQGNTTMILQEICS
DSTCTYMIYAPVDTAIINAVLSGGDPNFVALLPSGFVIFPDENSSMQNDEAKREGCLLTV
AFQIFIDSAPDSRIPAGTIDIVNSLLSCTCSRIRAIISSNNLQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggacatgactgaggagcaagagcagcagctccaacagaatgttatactaaatgagtcg
acaatgatggatcaattattcgatagcattctggatggtaccgatcgcttccctaacacc
ctaagaactgatgtgatcatgatcacatccgacattgcggaagattctcagaatcttggg
aagagaaagatcaatcatagacatacgacggaacaaatccaacggctcgaggagtttttt
caagaatttcctcatccggatgataaacaaaggaaggagttggggcaagaactctgtcta
gacccaatgcaagtgaaattttggttccaaaacaagagaacacaaataaggaatcaactt
gagcgagaggaaaatcaaaggctgaaagaagagaatgagcttcttctatccgacaacttg
aagttgaaggaagcactcaacagtgcttgttgtcccaactgtggtggcctgccctcactc
ggtgagatctctatcgacgagcaacaactactagccgaaaacagtcgtttacgagatcag
atcgaaagagtcaccgcaatggtagcaaagcgcacaggcgcacagctgataccgttccaa
tcagctggagttggagctcaaccaagatcggattcgggttcgggttcgggttcgagcaaa
aagaatagacctgagtttgggaagtcggcagctattgctttggctgagcttgccatggag
gagcttctgacactggctaagctgggcgagccgatgtgggtcgtcggccgcgacgggctc
actgaagccttaaaccaggccgagtatgcccgagctttcaaaaatgggctcggacctaag
aatgtgaacttgagtaccgaggccacccgggccactgccattgtggccgtgcctgcagag
acgctggtggacatgttcatggacgtggataagtggattgcgttgttctccagcattgtc
acaggagcagccattgtggaggtgttttccgatggagcagcgggaagctacgacggcact
ctgcaattgataacggctgagttacaggtcccaacgcctctcgttcctgttagggagggc
ttgttcttgaggcactgcaagcagcatgagggaggagtgtgggctgtggttgatgtttcc
ttcgaagtgcgccaaaatcccatggctaagttccggaggaggccctccggattcatcatt
catcaaatgcctaatgattgctcaaaggtcatatgggtggagcatgttgaagtggatggc
ggagaggttcatgacatgtacaagggagtcgtcaaatctggtcttgcatttggagcaaaa
agatggttagcgagaatggaaaggcaatgcgagaaattagccagtctcagcaattccact
gcttacatagggaacgctgagggaaccaagaacatactaaagctatcggaaaggatggtg
atgagcttttgcagtggtgtaagtggctctctgattcaccagtggactgaagtaactggt
gctgctacaaatgaggtgatgatcaggagcaggaagaacaatggagacccagggagacct
gccggcactgtacttggtgctagcacttcaatctggttgccaatcactcccaagagagtc
ttcgatttcctgagcaatttggcgacgcgcaaccagtgggacattttgctgcatggagcc
atggtttatgaagcagctaccgttttaaacagccaagaagaaggcaactgtgtctcccta
cttgcagttggacttcctggccagggaaacacgacgatgatactacaagagatctgcagt
gactcgacttgcacatacatgatttatgctcctgtcgatactgccataatcaatgcagtg
cttagtggtggagaccccaactttgtcgcactgctgccttcaggcttcgtcatattccct
gatgaaaattcttccatgcaaaatgatgaggctaaacgcgaggggtgtcttcttactgtg
gcatttcagatctttatcgactcagctcctgattctagaattcctgctggaactatagac
atagtgaacagccttttgtcttgcacctgtagcagaataagagccattatctcatccaat
aatcttcagtaa
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