Zingiber officinale (ginger): 122052536
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Entry
122052536 CDS
T08725
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY2-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122052536
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122052536
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122052536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
DUF2921
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
122052536
NCBI-ProteinID:
XP_042470038
LinkDB
All DBs
Position
3A:139215816..139258181
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AA seq
559 aa
AA seq
DB search
MEGRRGERGCLWSVAVLVVLLGLVRPLMALRPLKQRGFVSDGDWGEEQLFLKRDDSYSPF
SQWNITGTYTGHWSFLDVTNGSSRFLDFGKSSGVSVLELVTTQTKIRGVHNVQGSITFHD
VFDNEHDHEIAQMRLEGVYIWPFQKLRMVANSVLNDEPLQQEYFSNPYHLIRLFSSQVLQ
ESIQDRLPRKKSVTYDIDKHCHIEIAAQVLRVPSRQNDGNHELYHLEGLMEGPAIDSDGE
CFSSISLNATSLNTEAYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMI
GQQALMDAYVCLLNLTSGILVESLFNAFATAAFFKFVVFSIFEMRYLLSIWKARRPLQNG
ESWETMRRELSVLYSCFYGILLGGILLIYHLQNFLRSVIFIMYSFWIPQIVTNVIWDTRK
PLHPYYIIGMSVSRLAIPFYIFGCPSNFLRIEVDNYWCIYLGVFMGLQVMVLLLQHYLGS
RWFIPHQMLPEKYCYYRKFESYASQAADCVICMATIDFSENSNRYMVTPCDHCFHSECLQ
RWMDIKMECPTCRRALSPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaggagaggggaaagagggtgtttgtggagtgtggcggtgctcgtggtgttg
cttggtctggttagacccttgatggctctgaggcctctgaaacaaaggggttttgtgtct
gatggagattggggcgaagagcagcttttccttaagagagatgacagctacagtccgttt
tctcagtggaatattacagggacatatacaggacactggagctttttagatgtaacaaat
ggttcttctaggttcctagattttgggaaatctagcggtgtatcagttctagaattggtg
actactcaaaccaagattcgtggagtacacaatgttcagggatccattactttccatgat
gtttttgacaatgaacatgatcatgaaattgctcaaatgagactagaaggagtgtatatt
tggcctttccaaaaacttcggatggtagcaaacagtgttctgaatgatgagccacttcaa
caagagtatttctccaatccttatcatttgattagacttttctcctcccaagttcttcaa
gaatcaattcaagatcgactaccaagaaaaaaatctgtgacttatgacatcgataaacat
tgtcacatagagattgctgctcaagttttgcgagttccatctagacaaaatgatggaaat
catgagctttaccatttagaggggttaatggagggtccagcaatagatagcgatggagag
tgcttttcctcaatctcgttgaatgcaacttctttgaatactgaagcctattacaacaaa
gcagttaactatacattgatggtcacttttatatcttttcttcaagttcttctgttgatt
agacaaatggagcatagcaatactcaatctggtgctgctaaggtttctattctgatgatt
ggtcaacaagctcttatggatgcatatgtgtgcctcttgaatttgacttctggaatttta
gtagagtccctattcaatgcttttgcaacagcagctttcttcaagtttgttgttttttca
attttcgagatgagatatcttctttctatatggaaagcaagaagacctttgcaaaatggt
gaaagctgggaaactatgaggcgcgaattatctgttctgtatagctgtttctatgggatt
ttgttaggtggtatcctgctaatatatcatctacagaatttcttgcgctctgttattttc
attatgtactcattttggataccccagatagtgactaatgtcatttgggatacaagaaaa
cccctgcacccatattatataatcgggatgtctgttagtcgcctcgccataccattttac
atatttggctgtccaagcaactttttgcgtatagaggtggataactattggtgcatatat
ttgggagtatttatgggattgcaagtaatggttctcttacttcagcattatcttggatcc
cgatggttcattcctcatcagatgcttcctgaaaagtactgctattacaggaagtttgaa
agttatgcatctcaagcagcagattgtgtcatttgcatggctaccattgacttctcggaa
aactcaaatcgctatatggtgacaccttgtgatcattgcttccactctgaatgcttacag
agatggatggatattaagatggaatgcccgacatgcaggcgtgctctttccccagcatag
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integrated database retrieval system
