Zingiber officinale (ginger): 122052661
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Entry
122052661 CDS
T08725
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122052661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052661
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122052661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
122052661
NCBI-ProteinID:
XP_042470244
LinkDB
All DBs
Position
3A:145795542..145805649
Genome browser
AA seq
1041 aa
AA seq
DB search
MEQPTFPGRPTSSFPTAPKASAPLRSSGPIVGLDGSIPSRAPTPFASSGPVAEFGSSFTP
QTTSPFFSSVPAVGPQPANFGELPPPIRPSGPSSPPSYQVQNVGSYQQMQPARYHPIAQS
SVPLGSPPFIGQPRGSPYTGSFQPQSQTPTVSMGLTPQSSSQMIPRNTVPQLSEPSFTAT
KIPSQPPLHAYSNVPPRSSIPSFQPDPQFHASGPVSQPPMQGFTPAHVPARHASPYAHQS
IVPPPPPIGGPLGYTSRDQLQHPLTGPPLGGVQSLVEEFQSLSVGSVPGSLNPGVDTNLL
PRPLSGDEISTKIPEMYHLNCHPRFLRLTTHAIPNSQSLFSRWHLPLGAVVQPLAETPDG
DEVPVINFGPVGIVRCRRCRTYINPYVMFTDAGRKWRCNLCSFLNDVPAEYYCGLDASGR
RSDIDQRPELCKGSVEFVASTEYMVRPPMPPLYFFLIDVSVSAVRSGLLEIVAKTIKSCL
DDLPGFPRTQIGFITFDNTLHFHNLKSSLTQPQMLVVSDLDDIFLPLPDDLLVNLSESRH
VVEAFLDSLPVMFQSSVNVESALGPALKASFMVMSQLGGKLLIFQSTLPSLGVGRLRLRG
DDLRVYGTDKEHILRLPEDSFYKQMAAEFTKNQIAVDIYAFSEKYTDIASLGSLAKYTGG
QVYHYPSFQVAIHHEKLSYELGRNLRRETAWEAVMRIRCGKGVRFTNYHGHFMLRSTDLL
ALPAVDCDKAFAMQLSLEENLMTTQTVYFQVALLYTSSTGERRIRVHTAAAPVVTDLNEM
YNQADTGAIISLLGRIAIENSLSQKLDDARQSIHLKLMKSLKEYRNLFAVQHRLSGRLIY
PESLRLLPLYVLALCKSVALRGGYADAPLDDRCAAGYTMMILPVSRMLKLLYPSLFRIDE
NLLKDGKESQEPLIQLPLTALNLDPKGIYILDDGFNFVIWLGRMLPADLVSNILGADLAG
VPDLSKAVVFEHDNPISKKLLMILNRLREKNFSSYPSCRLVRQGEQPRELSLFLANLVED
PTAGSSSYVDWIFQVHRQSQS
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccaacttttccaggaagacccacctcatcctttccaactgctccaaaagct
tcagcacctctcagatcctcaggtcctattgttggcttggatggatctattccttctcga
gctcctactccttttgcctcttcaggtcctgtagctgaatttgggtcatcttttactcca
caaactacatcgccatttttctcctctgttcctgctgttggcccgcagccggctaacttc
ggagagctgccaccacctattaggccgagtggcccttctagtcctccatcttatcaagtt
cagaatgtcggttcttatcagcaaatgcaacccgcaagatatcatccaattgctcaatct
tcggtgcccttgggctctccaccttttattggtcagccacgcgggtcgccatatactgga
tcgtttcagcctcaatctcaaactcctacagtgtcaatgggtctcacaccacaaagttca
tcgcaaatgataccaagaaatactgtgcctcagctatcagagccatcatttactgcaact
aaaataccatctcaaccacctttgcatgcatattcaaatgtacccccaaggtctagcata
ccctcatttcaaccagatccacagtttcatgcttctgggccagtttcccaaccaccgatg
cagggtttcacacctgctcatgttcctgccagacatgcttctccttatgctcaccaaagt
attgtgcctccaccgcctcctattggaggtccattgggttatacttcaagggatcagctg
cagcatcctttgacaggacctcctcttggaggtgttcaaagtctagttgaagaatttcag
tcattatctgttggatctgttcctgggtccctcaatcctggagttgatacaaacttactt
ccaaggccactaagcggggatgaaatttcaactaaaattcctgagatgtaccacttgaat
tgccatccaagattcttacggctgactactcatgcaataccaaattctcagtcattgttt
tctaggtggcatttgcctcttggagcagtggttcagcctctagctgaaactcctgatggg
gatgaggtaccagtcatcaattttgggccagtgggcattgttcgctgccgaagatgtcgt
acatatataaatccctatgtgatgttcacagatgctggaaggaagtggaggtgcaacctt
tgttctttcctcaatgatgtgcctgcggaatattattgtgggctggatgccagtggcaga
agatctgatattgaccaaagacctgagctatgcaaaggtagtgtagaatttgttgcttca
acagagtacatggttcgaccacctatgccgcctctatactttttcctcattgatgtgtcc
gtatccgctgttcgttctggtttgcttgagattgttgcaaagaccatcaaatcctgcctt
gatgatttacctggctttcctaggacacaaattggctttataacatttgacaacacattg
catttccacaatctgaagtcttctttaacacagcctcaaatgttggtggtatctgatctg
gatgatatatttttaccactgcctgatgatcttctcgtcaacttatctgaatctaggcat
gtagttgaagcattccttgatagcttgccggttatgttccagagctccgttaatgtagaa
tcagcccttgggcctgctcttaaagcatcattcatggttatgagtcaacttggagggaag
ttgctcatttttcagagtacattgccatcacttggtgttggccgtttgagacttcgtgga
gatgatcttcgtgtttatgggacagacaaagaacatattttaagactacctgaagattca
ttctataagcagatggctgccgagtttacaaagaaccagattgcagtggacatatatgct
ttcagtgagaagtacacagatattgcttctttaggatctctggccaagtatactggtggc
caggtatatcattatccatcatttcaggttgctattcaccatgagaaacttagctatgag
ttgggtaggaatcttagaagggagactgcctgggaagctgtgatgcgcataagatgtggg
aaaggtgtccgctttacaaattaccatggacattttatgctacgatcaactgatttgtta
gcccttcctgctgtagattgtgacaaagccttcgcaatgcagttgtctctggaagaaaac
ctaatgacaactcaaactgtatactttcaagttgcccttttatatacttcctcaacaggt
gagagacgaattagagttcacacagcagctgcaccagtagtaaccgatcttaatgagatg
tacaatcaggcggatactggtgccattatctctttgttgggtaggattgcaattgagaac
tcactatcacagaagctggacgatgctagacaatcaattcatttgaaactcatgaaaagc
cttaaagagtaccgaaatctctttgctgttcagcaccgtctgagtggaagactgatatat
ccagaatctttgagattgttgccattgtatgtattggctctttgtaaatctgtagctctt
cgtggagggtatgccgatgctccgctagatgatcgatgtgcagctggttacactatgatg
atactacctgtaagcaggatgcttaaacttctctatccttccttgtttaggatcgatgag
aatcttctgaaggacggaaaagaatctcaggaaccattgatacagttaccgctaacagcc
ctaaacttggatcccaaaggcatttatattttagatgacgggttcaactttgttatttgg
ttaggcaggatgctcccagctgatttagtcagtaatatccttggagctgatttagctggc
gtccccgatctatccaaggctgtggttttcgaacatgacaaccccatctcaaagaaactg
ttgatgatattgaaccgattgagagaaaagaacttttcgtcctatccatcctgtcgcctc
gtaaggcagggcgaacaaccgagagagctctccctgtttcttgccaatctcgtcgaggac
ccaaccgctggatccagcagctacgtcgattggatctttcaagttcataggcaatcacag
agctaa
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