Zingiber officinale (ginger): 122052684
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Entry
122052684 CDS
T08725
Name
(RefSeq) histone H2A variant 1
KO
K11251
histone H2A
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122052684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122052684
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122052684
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
122052684
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122052684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
Histone_H2A_C
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
122052684
NCBI-ProteinID:
XP_042470282
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All DBs
Position
3A:complement(146316581..146335911)
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AA seq
136 aa
AA seq
DB search
MAGKGGKGLLAAKTTAANKDKDKDKKKPVSRSARAGLQFPVGRIHRLLKSRIQANGRVGA
TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
VIPHIHKSLINKSSKE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaagggagggaaggggctccttgcggcgaagacgacggcggcgaacaaggac
aaggataaagacaagaagaagccagtctcccggtctgcgcgcgctgggttgcagtttcca
gttggccgaattcaccggctgctgaagtccaggattcaagcgaatggccgcgtcggagcc
actgcagccgtgtactcagctgcaatactggagtacttgacagcagaagtgttggagctt
gcagggaatgcgagcaaggatctcaaggtgaagcgaatcactccgcgccatcttcagctt
gccattcgaggggatgaggagctagacaccctcatcaagggcaccattgccggtggcgga
gtcatcccacacatccacaaatccctcatcaacaagtcctccaaggagtga
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integrated database retrieval system