Zingiber officinale (ginger): 122052699
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Entry
122052699 CDS
T08725
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122052699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052699
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122052699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
122052699
NCBI-ProteinID:
XP_042470303
LinkDB
All DBs
Position
3A:146778026..146792750
Genome browser
AA seq
1689 aa
AA seq
DB search
MTSFQPLGGTSRSGRVLGPALDKIIKNAAWRKHANLVAVCKSALDRLDSLPDSPDPSVLL
GIPPSDADSVLHPLVLAIDSAYPKVADTALECAQKLFSHGLFRGDINLPADGDDAPGSSA
SRLLASVCSCGGIGDEVLELAMLRVLIASARSPFVLIRDECLAQIIRSCYNVYLGSQSGA
NQLCAKLVLAQIVVIVFARTEADSTDVRTRIVSIADMMDLSDRNLNDSTLVQSAQNFINE
VMAGSDADPLPSKSNKEEGLMPPDSEEEAAANGGGLSKIREDGLFLFRNLCKLSMKFSAQ
ENPEDPLLMRGKVLSLELLKIGIENAGPLWRANERFLGAIKQYLCLSLLKNSALSMMTIF
QLLCSIFMGLMSKFRSGLKEEVGVFFPMLVLRIVENVLQPSFLQKMTVLNLLEKICQDPQ
VMVDIFVNYDCDVNAPNIFERVVNGLLKTALGVPTGSVTSLSPAQDTTLQIESVKCLNCI
IKSMGVWMDQQLKLGDFAPERHINKHSSDNLASLNGEEGGVTDYDLHLDANHEFSDAASL
EQRRAYKLEFQKGVALFNKKPSKGIDFLIKTKKIGASPEEVASFLKNASGLNAAMIGDYL
GEREEFPLKVMHAYVDSINFENMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCS
PSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMSKAEFIRNNRGINDGKDLPEEYLGSLY
DQIVKSEIKISADVSAPQNKQTSSINKLLGFDNIFNLVNWKQYEEKALGASDQLIKHIQG
QFRAKTGKSESMFYTVTDTAILRFMMEACWAPMMAAFSMTLDQSDDKSATAQCLQGFRYA
VHVTSVMLMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNYLQESWDH
IFTCLSRFEHLQLLGEGAPPDASFFVAPLNEAEDRAQKTTFVKKKGNALQNPAVMAVVRG
GSYDSASMGNTASALVTPDQINNFISNLNLLDQIGTFELNHIFAHSQRLNSDAIVAFVRA
LCKVSMTELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSCIWNVLSEFFVSVGLSENLSV
AIFVMDALRQLAMKFLEREELANYNFQNEFLKPFVVVMQKSDSAEIRELIVRCVSQMVLS
RVNHVKSGWKSVFLVFTTAASDVRKSIVLLAFETIEKIVRDYFPYITETETTTFTDCVKC
LIAFTNSRFNNDASLNAIAFLRFCAVKLADGGLVCYDNNSEGHLGNGDGSDGNLTEKDDH
AFFWFPLLEGLSKLTSDTRPAIRKGALEVLFNILKDHGHLFTETFWINILKSVIYPIFSN
TQNITVGQVLLVHDPQFPNDDSTKSETDTLAAKCLVDLFVRFFNVVRSQLGSVVCIVTSF
VSSPYKHYANTGMAALLHLTAHLGSKLSKEEWKDILVPLKKSVASMLPVFSSIIRIMQDI
EIPDSVDQYSDHEYINEDEEEANMETASYAIVRMKNHISVQLQIVQVVKKLYEVHRKCFS
AAHVSILLDVLTSIASHSSEVSSETIVQQKLQKACSLLEIPGPPVIHFENESYENLLKFL
QTILAEDPVLSNELKIESLVVFVCQKIFKIYLNCAGQQQNDETSDAGPTAHSTLPLGTAK
KEELAARTSLLVSALQVLRSLRQDSFRRNLRIVFPSLVSLVSCEHHSNEVLDELHDIFQS
SIGPLLMNM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttccagcctctcggcgggacctcccgctccggccgcgtcctcggccccgcc
ctcgacaagatcatcaagaacgccgcctggcgcaagcacgccaacctcgtcgctgtctgc
aagtccgccctagatcgcctagactccctccccgactcccccgacccctccgtcctcctc
ggcatccctccttccgacgccgactctgtcctccaccccctcgtcctcgccattgactcc
gcctaccccaaggtcgccgataccgccctcgagtgcgcccagaagctcttctcgcacggt
ctcttccgcggcgacatcaacctcccagccgacggcgacgatgcccccggctcctccgcc
tctcgactcctcgcttcagtctgcagctgcggagggatcggcgatgaggtcctcgaactc
gcgatgctcagggtccttattgcttccgcccgctcacccttcgtgctgatccgcgacgaa
tgcttggcccagatcatccggagctgctacaatgtgtaccttggcagccagagcggagcc
aatcagctgtgtgccaagttggtactggctcagatcgtcgttatcgtttttgctaggacg
gaggctgattccacggatgtcaggacccgaatagtctccattgccgacatgatggatctc
tccgataggaacttgaatgattcaactctggtgcagtctgcgcagaattttattaacgag
gtaatggcgggaagcgacgcagaccctctgccttctaaatcaaacaaggaggagggtttg
atgccgccggattcagaggaagaagctgctgcaaatggcggtggactgagcaagatcaga
gaggatggattgtttcttttcagaaacttgtgcaagctctcaatgaagttctcggcacaa
gagaatcctgaggaccctctcttgatgagggggaaggttttgtcactggagcttctaaag
ataggaatagaaaatgctgggcctctttggcgggcaaatgagaggtttcttggagcaatc
aaacaatacctttgcttatcgttattgaagaacagtgccctatcaatgatgactattttt
cagcttctttgctctatttttatgggtttaatgtcgaaatttagatcagggctgaaggag
gaagttggagttttctttccaatgcttgtcctgcgaatcgttgagaatgttcttcagcct
agctttttgcagaaaatgacagttctcaacctattggaaaagatctgccaggacccacag
gttatggttgacatttttgtgaactatgattgtgatgtgaatgcgccaaatatttttgaa
agggttgttaatggtctgctaaagactgctctaggtgtccccaccgggtcagtgacatca
ctatccccagctcaggataccacattacagattgaatcagtgaagtgcctcaattgtatc
attaagtcaatgggtgtgtggatggaccagcagctgaaattgggtgattttgctccagag
agacatataaataagcattcttcagataaccttgcctctttgaatggtgaagaaggaggt
gtgactgactatgatctgcatttggatgcaaaccatgagttctctgatgctgcttcattg
gaacaacgcagggcatataagttggagtttcagaaaggtgttgcattgtttaataaaaaa
ccttcaaagggaattgattttctaatcaaaaccaagaaaataggtgcatctccagaagaa
gtagcttcgttcttgaagaatgcttctggtctaaatgcagctatgatcggagactacttg
ggtgaaagggaagagttccctctgaaagtcatgcatgcttatgttgactcaataaatttt
gagaatatgaattttggcgaagctattaggttcttcttaagaggtttcagattgcctgga
gaagcacagaagattgatcgcataatggaaaagtttgcagaacgatactgtaaatgcagt
ccaagttctttcaccagtgcagatacagcatatgttcttgcttattctgtgattatgttg
aacactgatgcacacaacagcatggttaaagataagatgtcaaaagctgagtttattcgc
aacaatcgaggaataaatgatggaaaggatttaccagaagaataccttggttctttgtat
gatcaaattgtgaaaagtgaaataaaaatcagtgctgatgtttctgctccacaaaataaa
cagacgagcagcatcaacaagcttttggggtttgacaacattttcaatttggtcaattgg
aaacaatatgaagagaaggcattaggtgcaagtgatcaactaatcaagcacatccaaggg
caatttagagcaaagactggaaaatcagagtctatgttctatactgtcacggatactgca
atcctaagatttatgatggaggcttgttgggctcccatgatggctgctttcagtatgaca
cttgaccaaagtgatgacaagtctgccacagcacagtgtttacaaggtttccgatatgca
gttcatgtcacttcagtgatgcttatgcagacacaaagagatgcttttgttacatctgtt
gccaaattcacataccttcattgtgctgctgatatgaagcagaagaatgttgatgctgtt
aaggctataatatcaattgccattgaagatggtaattatctgcaagaatcctgggatcat
atatttacatgtctttcacggttcgagcatttacagctgctaggagagggtgcaccacct
gatgcttcattttttgtagcaccacttaatgaagcagaagacagagcacagaaaacaaca
ttcgtgaagaagaaaggaaatgctcttcaaaatccagcagtaatggcagtggttcgaggg
ggttcttatgatagtgcatctatgggaaatacggcttcagctttagttactccggatcag
attaataacttcatttccaatttaaatctgttggaccagattggtacttttgagttaaac
catatatttgctcatagccaaagattgaatagtgatgcaattgtagcttttgtaagggcc
ctgtgcaaggtttctatgacagaactgcaatctccgactgatccacgtgttttcagcctc
acaaaaatagttgaaatagcacattacaatatgaatcgaatccgtttggtttggtcctgc
atctggaatgttctttctgaattttttgtttcagttggattatcagaaaatctctcggtt
gcaatctttgtaatggatgcattaaggcaattggctatgaaattcttggagcgtgaagag
cttgctaattataatttccagaatgaattcttgaaaccttttgtggttgtcatgcagaaa
agtgattcggctgaaattcgtgagctcattgttcgatgtgtttctcagatggttttgagt
cgtgttaatcatgtgaagtcagggtggaaaagtgttttcttggttttcacaactgctgcc
tcagatgtacgtaagagtatcgtgctgttagcttttgagacaatagagaaaatagttcga
gattattttccttacattactgagacagagaccacaacattcactgactgtgttaagtgc
ttgattgcatttacaaatagcagattcaataatgatgcaagcctcaacgctattgcattc
ctccgattctgtgctgttaaactggcagacggtggtcttgtctgctacgacaacaattct
gagggtcatttaggaaatggggatggttcggatggcaatttgactgaaaaagatgatcat
gctttcttttggtttcctttactagaaggtttatccaagctgacgtctgatactcggcca
gctatcagaaaaggtgctctagaagtactcttcaatattctgaaggaccatggtcacctc
tttactgagacgttctggattaatatcctgaaatctgtgatttaccccatttttagcaat
acacagaatataactgttggtcaagttctactggttcatgatcctcagtttccaaatgat
gattctaccaaatctgaaacagatactttggcagcaaaatgcttagtcgacctgtttgtc
agatttttcaatgttgtgcgctcacaacttgggagtgttgtatgtattgttacaagtttt
gttagcagtccctacaagcattatgctaatacaggaatggctgccctactccatttgact
gcccatctgggaagcaagctatccaaagaagaatggaaagatattttggtacccttaaaa
aagtcagttgcttcaatgctgcctgttttttctagcatcataagaatcatgcaagacatt
gaaattccggatagtgtggatcaatattctgatcacgaatacattaacgaggatgaggaa
gaggctaatatggaaacagcctcgtatgcaattgtcagaatgaagaaccacataagtgtt
cagctccagattgtacaggttgtaaagaagctttatgaagttcatcgaaagtgcttttca
gctgctcatgttagcatcctactggacgtacttacatccattgcttcgcattcaagcgaa
gtaagcagtgaaaccatcgtccaacagaagctgcaaaaagcatgctccctgttggagatt
cccggtccaccagtcattcatttcgagaacgagtcctatgagaacctgctcaaattcttg
caaactatacttgctgaagatcctgttctgtcaaacgaactgaaaatagaatcactcgtg
gtgttcgtttgccaaaaaatattcaagatctacttgaactgtgcgggacaacaacagaac
gatgagacttcagatgctggtccaacagctcactctacactccctttgggcactgctaag
aaagaggaactggctgcacggacatcgctacttgtctcggccttgcaagtcttacgtagc
ttgaggcaggattcattccgaaggaacttacgcattgtttttccgtccttagttagcctt
gtaagttgcgaacatcactccaacgaagtgctggatgagctacatgatatttttcaatcc
tctataggaccactgctaatgaacatgtga
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integrated database retrieval system
