KEGG   Zingiber officinale (ginger): 122052782
Entry
122052782         CDS       T08725                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122052782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122052782
   03400 DNA repair and recombination proteins [BR:zof03400]
    122052782
Spliceosome [BR:zof03041]
 Complex B
  Other components
   Prp19 complex
    122052782
 Complex C
   Prp19-CDC5 complex
    122052782
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122052782
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 122052782
NCBI-ProteinID: XP_042470421
LinkDB
Position
3A:complement(149716191..149729410)
AA seq 244 aa
MATKEILMLEAAPDAVREAWSAGPDADVVDALPYIDDDYGDPRVAAEVDRLVEEEMRRGT
KKPADFLRELPPLPKVNFEDHPMLAREYERVRAGKPPAILEMSRYGLEPPPANKRNDVTA
WRLALRNAQSLVQHEVIRIENLELLVNHGADVWKLQNKRTESYLSRLEATAMEYDKMIEA
VNRDRKFQQQNTGGQLNMLNAQWKELCLKNIEIQSACSDLQNAIDQMKEEAKQLGLDLDA
KMES
NT seq 735 nt   +upstreamnt  +downstreamnt
atggccaccaaagagatcctcatgctagaggcggcgccggatgccgtccgcgaagcgtgg
tctgccggtcccgatgcggatgtcgtcgatgctttgccctacatcgacgatgactacggc
gatcccagggtagccgcagaggtcgaccggctcgtcgaggaggaaatgcggaggggcacc
aagaagccagctgactttctgcgggaactcccacccctcccaaaagttaactttgaggat
caccctatgcttgctagagaatatgaacgtgtcagagctggcaagcctccggcaattctg
gagatgtcccgctatggattggaacctccacctgcaaacaaacgcaatgatgttactgct
tggaggctggctttacggaatgcacaaagccttgtacagcatgaagttattaggattgaa
aatctggagttgctggtgaatcatggtgctgatgtctggaagcttcagaacaaacgaacg
gaatcgtatttatccagattagaagctacagcaatggaatacgacaaaatgatagaagca
gttaatcgtgacagaaagtttcagcagcaaaatactggcggtcaactcaatatgctgaat
gcacagtggaaggaattatgtcttaagaacatagagatccaatctgcatgttctgatctg
cagaatgctattgatcaaatgaaggaagaggctaaacaacttggcttagatttggatgca
aaaatggaaagttag

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