Zingiber officinale (ginger): 122052845
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Entry
122052845 CDS
T08725
Name
(RefSeq) protein PAF1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122052845
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
122052845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
122052845
NCBI-ProteinID:
XP_042470512
LinkDB
All DBs
Position
1B:23460388..23466868
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AA seq
698 aa
AA seq
DB search
MSSFRPYPPLPPPVGGPPPVPNQNHPFPPTLNPQFQPYPSQPHGGYPASGADASGYGRIP
PGSAPHPGFADPFNLPASQQQYPYAPSVPQAPPPPSGAYPPPPPPPQSQPSMYYPSSQYP
IQYNPPSQPPPPPPSASPPPPPSVPPPPSPPPPSLSNQVQSAPPAINLHHHIATKVAPPS
GRQQKPSLPPKQQKPPPGPSAGRPTFQSGGPNGISGRIETEEERRLRKKREYEKQKQEEK
RLLFLKQSQSTVLQKTQMLAGNARPNGSMTGSRMTDRRTTPFLGGDRIENRLKKPTTFIC
KMKFRNELPDPTTQPKLLAMNKDKDRFSRYKITSIEKMLKPKLYVEQDLGIPLDLLDMSI
YNPHAVRLPLAHEDEELLREEEVVTPIKQEGIRRKERPTDKGVSWLVKTQYISPISTEAA
KMSLSEKQAKEMRESREGRNLFLENLNNSREKQIQAIEESFRAAKLPPVHQSKPGLEPVE
ILPLLPFFDKYEDQFVMVNFDGDPTADSEQYNKLDRSILDELESQAIMKSFIVNGSDPNN
PDKFLAYMAPAPDELYKDKKTENEDTTYTWLREYHWDVRGEDTDDPTTYLVTFEEKDAHY
LPLPTKLVLQKKAKEGRSVDEAEHFLAPSKVTVRNKSANTVAESNEYEEISGKNGKPDGV
KRKGGASSMYDDDLEEERHKFTRTDDIDQLSGEEELYD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttccgtccgtacccccctcttccacctccggtaggggggccacctccagtg
cccaaccagaaccatccctttccccctaccctcaacccccagttccagccctatccatcc
caaccccacgggggctatcccgcctccggcgccgacgcctccggctacggccgtatcccg
ccaggctccgctccgcaccctgggttcgctgacccattcaatctgccggctagccaacag
cagtatccttacgccccttccgtaccccaggcgcctccgcctccctcgggtgcttacccc
cctcctccgccaccgccacagtcgcaaccttcgatgtactacccttcttcacagtaccca
atccagtataaccctccttctcagccaccaccaccccctccgtcagcgtctccgccgcct
ccaccatcggttccgcctcccccgtctccgccgcccccttctctgtctaatcaggtccaa
tctgctcctccagccattaacttgcaccaccatatcgccacaaaagttgccccgccttcc
gggcgccagcagaaaccatcgctcccgcctaagcagcagaagcctcctcctggaccgtct
gccgggaggcccaccttccagtccggaggtccaaatggaatctcgggaaggatcgagacg
gaggaggagaggagattgcggaagaaaagagaatatgagaaacaaaagcaggaggagaag
aggcttcttttcttgaaacagtcacagtcaactgtgctgcaaaagacccaaatgcttgca
ggcaatgcacggccgaatggctcaatgactggttctcgcatgacagatcgccggacaact
ccattcttgggcggggatagaattgaaaaccggcttaagaagcctacgactttcatctgc
aagatgaagtttagaaatgagttgccagatccaacaacacaaccaaaactattagcaatg
aacaaggataaagatcgatttagcaggtacaaaattacatccatagaaaagatgctaaag
cctaaactctatgttgaacaagatcttgggatacctcttgacctacttgatatgagcata
tacaatccacacgctgttcgtctcccccttgcccatgaagatgaagaactattgcgtgag
gaggaggtagtaactcctatcaaacaagaaggtataagaaggaaagagagacctacagat
aaaggtgtttcttggttggttaagactcaatacatttctcctattagcacggaagcagca
aaaatgagtctttctgagaaacaagcaaaggagatgcgtgaatcaagagaaggaagaaat
cttttcttggagaatctgaacaatagcagggagaaacaaattcaagctatcgaagaatca
ttcagggcagccaaactacctcctgttcatcaatctaaacctggactagaacctgtggag
attttgcctttgttaccattttttgacaaatatgaagatcagtttgttatggtaaacttt
gatggagatccaacagctgattcagaacaatataacaagttagacagatctattctcgat
gagcttgagtcacaggctataatgaagagctttattgtgaatggctcagatccaaacaac
cctgacaaattccttgcctacatggctcctgcaccagatgagttgtacaaggacaagaaa
actgaaaatgaagatacaacatatacctggcttcgggagtatcattgggatgtaaggggt
gaggatactgatgatccaacaacttacctagttacattcgaagagaaagatgcccactat
ttgcctctacctacaaagcttgttctgcaaaagaaggcaaaagaaggaaggtcagtagat
gaagctgagcattttctagcgccatcaaaggttaccgtgaggaataaatcagctaacaca
gttgcagagtcgaatgaatatgaggagatatcaggaaaaaatggaaaaccagatggtgta
aagagaaagggaggagcttcttcaatgtatgatgatgacctcgaagaggaacgacataaa
tttacgaggacggatgacatagatcagttaagcggagaggaagaactgtatgattaa
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