Zingiber officinale (ginger): 122052891
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Entry
122052891 CDS
T08725
Name
(RefSeq) vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03250
Viral life cycle - HIV-1
zof03272
Virion - Hepatitis viruses
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122052891
03272 Virion - Hepatitis viruses
122052891
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122052891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122052891
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
122052891
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122052891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF4709
Motif
Other DBs
NCBI-GeneID:
122052891
NCBI-ProteinID:
XP_042470564
LinkDB
All DBs
Position
3A:complement(153472102..153486274)
Genome browser
AA seq
857 aa
AA seq
DB search
MSFPTAVRVMLAVQEKKPSAVDIYRPLRQYIVTAYGELEAQAAEDDLDAVRQLRLDLEKP
PDAAATPGLRRDLLLSYYRALSVIEPRFPISPDRAHVHSLTFTWFDAFKPNKKASQQSIH
LEKAAVLFNLGAVNSQIALSADRTDAAGLKHACNAFQSAAGAFAYLKDHAAGRASAGGAT
VDLSVECAAMLEKLMLAQAQECFFEKVIADSKPPALCSKVARQVGLYYEETYATLNSPLL
NQHLDRTWISHVQLKAAQYYAEACYRCSLDLHEKEEIAEEICRLKIGINALADAKKSIRG
VPQPLLDAVNKLETNMNQNLERAVKENNRVYLMRVPEASSLAALPAASLVKPISMAEVLD
ASKETLFSRIVPDSCTRVLSKYTDMVDNIIRTQAEKLQQGSEITRVKLKEMDLPESILAL
EGNFSLPVELKEDVEAVQISGGPSSLEAELQQLRDLTRVNQELLVQTEELLQKEANEDAQ
FRAQFGTKWRRPQSSTLTKNLQDRLNKFTANIKQAADSDARIERSISDNLELMAILNRRP
IESALPSLARPIMSLDGNEDAIVGALKQSLRQLENLGAQRAGLEDMLKEMKRKDDILPKL
MSSTGSQEDLFRKEISKYDQICGEIAQNIEAQEQLLLQIQAQNEEFSAIFNLEDFKVARE
RSYKQIAAAVAKYREIKENTNEGLKFYVTLQDAITNIKQQCSDFAMTRSIQCREMIEDVQ
RQLPGLNFKADGRTGYSYPSADQASMQRNASQQSEQQSASQHPQAAFHNPPGEQPGYSHP
HPAYATAQQAPYPAPTAQYQDLQRPLSHQYGQPAYPGWHGSYYNAHQQPQGSQPPPPYMM
QSPYPPPPHQGSYYRPQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttccgacggcggtgagggtgatgcttgcggtgcaagagaagaagccgtccgcc
gtcgacatctatcggccgctccggcagtacatcgtcaccgcctacggagagctcgaggcc
caggcggcggaggacgacctcgacgccgtccgccagcttcgcctcgatctcgagaagccc
cccgacgccgctgcgaccccaggcctccgacgagatctgctcctctcctactaccgcgcc
ctctccgtcatcgagccccgctttcctatctctcctgaccgcgcccatgtccattcgctg
accttcacctggttcgacgccttcaagcccaacaagaaggcctcccagcagtcgatccac
ctcgagaaggccgccgtcctcttcaaccttggtgccgttaacagccagatcgcgctttcc
gctgatcgaactgatgctgcgggcctgaagcacgcctgcaatgccttccagagtgccgct
ggggcattcgcctatctcaaggatcatgccgcgggcagggcgagcgccggcggagccact
gtcgatctctccgtcgaatgcgctgcgatgctggagaaactgatgctagcgcaagcgcag
gagtgcttttttgaaaaggtcatcgcagactccaagccacctgccctttgctctaaggtt
gctcgccaggttggcctctattatgaggaaacttatgcaactttaaattctccactgctt
aaccagcacttagatcgtacatggatctctcatgtacaactcaaggcagctcagtactat
gcagaagcttgctatagatgttcgttggatcttcatgagaaggaagagattgctgaagag
atttgtaggctcaagattgggattaatgctcttgctgatgcaaaaaaatctataaggggt
gttccccaacctttgcttgatgctgtcaacaaattagagaccaatatgaaccagaacttg
gagagagctgtgaaggagaacaatcgggtttatttgatgagggttcctgaagcgagttcc
ttggctgctttacctgcagcctctcttgtcaaacctatttcgatggctgaagtattagat
gctagcaaggagacattattctctaggatagttccagacagctgcacaagggttctttcc
aagtacactgatatggtagacaacattattcggacacaggcagaaaagttgcagcaagga
agtgaaataactagagttaagcttaaagagatggatcttcctgagtctatcttagccttg
gaaggtaactttagtttgcctgtggaacttaaggaagatgttgaagcagtccagataagc
ggtggcccttctagtctggaagctgagctacaacaactcagagatttgacacgagttaat
caggaactcttggtccagactgaagagttgctgcagaaggaagcaaatgaggatgcacaa
ttccgagcccaatttggaacaaaatggagaagacctcagtcaagcaccttgacaaagaac
ctgcaggacagattgaataaattcactgcaaatattaagcaagctgcagatagtgatgcc
aggatagaacggtccataagcgacaatttggaactgatggcaattcttaaccgcagaccg
attgaatctgcattacctagtcttgcaaggcctatcatgtctttggatggcaatgaagat
gctattgtgggagcacttaaacagagcttgaggcaattggagaatttaggcgcacagagg
gcaggtcttgaagacatgttaaaagagatgaagagaaaggatgatatattaccaaagttg
atgtcaagcactggatcacaagaagatctctttaggaaggagatatccaagtatgatcag
atatgtggagaaattgctcagaatattgaggcgcaggagcaattgttgcttcaaattcag
gcacagaacgaagagttttctgctattttcaatctggaggacttcaaagttgctcgtgag
aggagctataaacagattgctgctgcagtagcaaaatatagagaaatcaaggagaacact
aatgaagggctgaagttttatgtgactcttcaggatgcaataacaaatataaagcagcaa
tgcagtgactttgcgatgaccagaagcattcagtgtcgggaaatgatcgaggatgtgcag
aggcagttacccggactcaacttcaaagctgatgggaggactggttatagttatccttca
gctgatcaagccagtatgcagaggaatgcttctcaacaatcggaacaacagagcgcttca
caacatcctcaggcagccttccataacccaccaggggagcagcccggatactctcatccc
caccctgcttatgccacggcccagcaggccccttacccggctccaactgctcaatatcag
gacttgcaacggccgctgagccatcagtacgggcaaccagcatatccaggatggcatgga
tcgtactacaatgcacatcaacagccacaaggttcacaacctccacctccatatatgatg
caatctccttatcctcccccacctcaccagggaagctattatagacctcaatga
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