Zingiber officinale (ginger): 122052939
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Entry
122052939 CDS
T08725
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122052939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122052939
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122052939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
NTF2_MEX67
Motif
Other DBs
NCBI-GeneID:
122052939
NCBI-ProteinID:
XP_042470636
LinkDB
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Position
3A:155633028..155655595
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AA seq
763 aa
AA seq
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MSEFVDLETQDGVRMTWNTFPGTKQEALSCVIPVAAMYTPLKPIPDTPVLPYSPLRCRIC
RSILNPFSVVDYVAKIWVCPFCFQRNHFPQHYMSISEENLPAELFPQYTTIEYASSPDTG
PKMPSVFLFVVDTCLIEEEIMFLKSALSQAIELLPENSLVGLITFGTYVQVHELGFGHMP
KSYVFKGSKEITKEQLLEQMCFFAGRPRPNVGVIAGPRDGLSPESIARFLLPASECEFVL
NSVLEELPRDPWPVPADQRASRCTSTALSIAASLLGLCVPGSGARIMAFVGGPSTQGSGS
IVSKNLSEPIRSHKDLDKGAAALYNKAVKFYEALSKQLVHQGHVLDLFACALDQVGVAEL
KVAVERTGGIVVLAESFGHSVFKDSLRRIFQSTDYDLGLAFNGVFEVNCSKDVKVQGIIG
PCASLEKKGPLCAETVVGQGNTTAWKMCGLDKKTSLCLIFEIARKDGPESISQHTSNQFY
FQFLTYYQHSDGQMRLRVTTLSRRWVTSSADVQDLLAGFDQEAAAAVMARLVSLKMEIED
DFDPIRWLDRSLIRLCSKFGDYQKDSPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPD
ETAYYRMILNRENVANAVVMIQPSLISYSFHSSPEPVLLDVTAIAADRILLLDSYFSVVV
FHGASIAQWRNSGYQNQPEHETFAYLLKAPREEADAIMKERFPVPRLVVCDQHGSQARFL
LVKLNPSVTYNSNNPPPPGGDILFTDDVSLEVFLDHLQRLAVQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcgtcgacctagagacacaggatggagtgcggatgacatggaacacattc
ccgggcacaaagcaggaggctttgagctgcgtgataccagttgccgctatgtacactcct
ctaaaacctattcctgatacgccagtgttgccttactcgcctcttaggtgtcggatctgt
cgctccatactcaaccctttctctgttgttgactatgttgccaagatttgggtatgccca
ttttgctttcagcggaatcactttccccagcattatatgtcaatttctgaggaaaacctc
cctgctgagctttttcctcagtatacaaccattgagtatgcatcctccccagatactggc
cctaaaatgccttcagtgttcctctttgttgttgacacatgtctgatagaggaggagatt
atgttcttgaagtctgccttgtcgcaggccattgagcttttgcctgagaattcccttgtt
ggtttaatcacttttggaacttatgtacaggttcatgaattagggtttggacatatgcca
aaatcttacgtgtttaagggatcaaaggaaatcactaaggagcagctcctggagcaaatg
tgtttctttgctgggaggccaaggcccaatgtgggggtaattgcagggcctagggatggc
ctctcaccagagagtattgctagattcctcttgcctgcctcagaatgcgaatttgtcttg
aattcagtacttgaagagcttccaagagacccttggcctgttccagctgaccaacgtgca
tcaagatgtacaagtactgcattaagtatcgcggctagtttgttggggctctgtgttcct
ggttcaggagcaaggataatggcttttgttggcggcccatctacccaaggatcaggatca
attgtatcaaagaatctttctgagccaattcgttctcacaaagatcttgataaaggagct
gctgcactttataataaagccgtcaaattctatgaggccctttcaaagcaacttgttcac
caaggccatgtgctggatttgtttgcttgtgcacttgatcaggttggtgtggcagaactt
aaagttgcagttgagagaacaggaggtattgttgttctagcagagagttttggacactct
gtttttaaggattcacttcgacgaatttttcagtcaactgattatgatcttggtttagca
ttcaacggtgtgttcgaagttaattgctcgaaggatgtaaaagttcagggtatcataggt
ccctgtgcttctcttgaaaaaaaaggacctctttgtgcagagacggttgttggtcagggg
aacacaactgcttggaagatgtgtggacttgataaaaagacatcattatgtctgatattt
gagatagccaggaaagatggtccagaatcaatctctcaacatacgagcaaccaattctac
ttccaatttttgacatattatcaacatagtgatggtcaaatgagattacgagtgactact
ctgtctagaagatgggtaactagttctgctgatgtgcaggatttgcttgctggttttgat
caagaagctgctgctgcagtcatggcacgattagtttctcttaagatggaaatagaggat
gattttgatccaataaggtggcttgatcgatcgctgatccgattatgttccaagtttggg
gattaccagaaagacagcccttcctcttttagtttgtctccacgtttatcgatatttcct
cagtttatgtttcatttgaggcgttcacaatttgtgcaggtctttaacaatagccctgat
gagacagcatactacaggatgattctcaaccgagagaatgttgcaaatgcagttgtcatg
atccaaccatcactgatttcttactcctttcattcttcccctgaaccagttcttctggat
gtaactgcaattgctgccgacaggatccttcttctggattcatattttagtgtagttgta
tttcatggagcaagcattgcacaatggcgaaattctggctaccaaaatcaacctgaacat
gagacatttgcttatttgcttaaagctccacgtgaggaagcagatgcaataatgaaagag
cgatttcctgttcctcgtttagttgtttgtgaccagcatggctctcaggctcgtttcctt
ttggtgaaactgaacccatccgtcacatacaactccaacaatcctcccccacctggtgga
gatatcttattcacagatgatgttagccttgaagtcttccttgatcatcttcagcgactt
gcagttcagtaa
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