Zingiber officinale (ginger): 122053018
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Entry
122053018 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 3-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122053018
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122053018
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
F-box_5
Motif
Other DBs
NCBI-GeneID:
122053018
NCBI-ProteinID:
XP_042470773
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Position
3A:158206971..158211677
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AA seq
714 aa
AA seq
DB search
MAETVGNLCRKMHGGEGFDTLTLDLFSRAPSPAPCSYSKPAKRPRVDGAVTMGKDEDRQN
PFDFLSEEILFLILDRLESEPLSKKSFSLVCRSFYTAESCHRRELTPLRSGLLPAALARY
PSVEKVDLSLCPTVTDTVLFSVGNCLRSSLRSIDLSRSKGFSHAGIESVVENCANLVEMN
LSNATDLSDAAAAAIGRARNLERLWLARCKLVTDMGIGCIAVGCQKLKLLCLKWCLGISD
LGVALVAVKCKQLRNLNLSFTLVTGAGLEVVLQLPYLEDLALVGCLCIDDGSLLSLKHEC
KSLQVLNLSNSQPINHAGLSSLLNITVGLRQLNMAYCCMVTHSLTSSFRKLAKLQSVKLD
GCEVTTAGLKTIANACVSLTELSLRKCSGVTDDGLSSIVMKNKGLTNLDITCCGNITDLS
LANITSSCTSLITLQMESCTLVSKEGFRLIGQHCHLLEHLDLTDNELDDEGLKAFSGCHK
LSILKIGICLKISDEGLIHIAKNCPKLRELDLYRSAGVKDAGIRAIAHGCPQLQITNLAY
CTWITDASLRALSKCSDLNTLEIRGCPQVSSAGVIAIAVGCPKLTKLDIKKCYYVNDAAM
LILARFSRNLHQINLSYCSITNVGLLALASVGCLQNMTILHLKGLTPNGLAAALLACGGL
TKVKLNSSFKPLIPRPLLEHVEERGCVFQWIDKPFQVELESSEIWAKQLEEMRA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaccgttggcaatctttgccggaagatgcacggcggcgaagggtttgacacc
ctaaccctcgatctcttctccagggccccgagtcctgctccctgctcctactccaagccg
gcgaagcgacctcgagtcgacggtgctgtcactatggggaaggacgaggatcgacagaat
cccttcgattttctgtccgaggaaattcttttcctgatcttggaccgcttggaatccgaa
ccgctgagcaagaaatcgttctcgctcgtatgcagatctttctacaccgccgaatcttgc
caccgtcgggaactcacgccgctccgctctggtctccttccggctgccctcgctcgctac
ccctctgtcgaaaaggtggacctctcactctgccctactgttaccgacaccgttctcttc
tctgttgggaactgcctacggtcgtcgctgcgctcgattgatctttcgcggtccaagggt
ttttcgcatgctgggatcgagagcgtggtggagaattgtgcgaatctggtagagatgaat
ctgtcaaacgccacggatctgagcgatgcggccgctgccgcgattgggcgagcgaggaat
ctcgagaggctgtggttggcaaggtgtaaattggtcacggatatggggattggatgcatc
gccgttggctgccagaagctgaagctactctgcttgaaatggtgcttagggatttcagat
ttgggggttgcgttggtggctgtgaagtgtaaacaactacgcaatttaaatctttccttc
acgctggtaacaggggcagggcttgaagtagtcctgcaattaccatatcttgaagatttg
gctttagttggatgcctctgtatagatgatggcagcctcctatctttgaagcacgagtgc
aagtcgctacaagtgctaaatttgtcaaactctcaacctattaatcatgctggattgtct
tccttgttaaatatcactgtaggtttacgccaactaaacatggcatactgttgcatggta
acccattcacttaccagtagctttcgaaagctcgccaaattgcagtctgtcaagttagat
ggttgtgaagtcacaacagctggattaaaaacaattgcaaacgcctgtgtatctttgact
gaacttagcctgagaaagtgttcaggagttacagatgatggtctttcttctatcgtcatg
aaaaataaggggttgactaatttggatattacatgctgtggcaacataactgatctctcc
cttgctaacattactagttcatgcacttccctcatcacccttcagatggaatcatgcact
ctagtatctaaggagggtttccgtctgattggtcagcattgtcacctcctggagcatctt
gatctcacagataacgaattggatgatgaaggactaaaagcattctcaggatgtcacaag
ctgtcaatcttaaaaattggcatatgcttgaaaattagtgatgaaggtcttattcacatt
gcaaaaaattgtccaaagctccgagagcttgatttgtacagatctgcaggagtaaaggat
gcaggtattagggcaatagctcatggctgcccacaattgcagatcaccaatctagcatat
tgtacatggataacagatgcttcactaagagccttatcaaagtgctcagatttgaacaca
ctggaaattcgaggctgtcctcaagtttcctctgcaggtgttatagctattgctgtgggc
tgccctaaacttacaaagcttgacatcaagaaatgctattatgtgaatgatgctgcaatg
cttattcttgcacgcttttctcggaatcttcaccagataaacttgtcttactgttcgata
accaatgtgggacttttagcacttgcaagtgttggctgcctccagaacatgacaatttta
catttaaaggggctaacaccaaatggtttggcagctgctttgttggcatgtggaggtcta
acaaaagtgaaactcaactcctcttttaaaccgttaattccaaggcctctgcttgaacat
gtagaggaacgggggtgtgtgtttcagtggatagacaagccttttcaggttgaactggaa
tcgagcgaaatctgggcgaagcaattggaggaaatgcgtgcttga
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