KEGG   Zingiber officinale (ginger): 122053042
Entry
122053042         CDS       T08725                                 
Name
(RefSeq) U6 snRNA phosphodiesterase-like isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122053042
Spliceosome [BR:zof03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122053042
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 122053042
NCBI-ProteinID: XP_042470825
LinkDB
Position
3A:158930406..158935559
AA seq 296 aa
MEALRATYGADSEGSDADDSPAAESMSSRNGAKINSFEVRQQLHPLPVSLPPPPLDLLQT
PDFPDFSSTTQGSRIRSFPHVEGNYALHVYIPVLIPTPIRTQLSIFIKQIASLVPGLFAV
DCDFPIAELCKDNAKLEQILLGREFHISLGRTVPIQAHQIESIVAMLRQRFQSQRRYFID
FNKWDVFVNDEQTRSFLALEVIGAGLSEISKQIRLVDVIYRLHGLPEFYKNPRPHISLLW
GLGETSGMLNQAVEKIERSSKNSSLPCRHIFTCKINGIECRIASMSAFIFVRAGVA
NT seq 891 nt   +upstreamnt  +downstreamnt
atggaagcgctgagggcaacctacggcgccgactccgaagggtcggacgcagatgattca
cctgctgccgaatcgatgagcagcagaaatggcgccaaaatcaactcattcgaggtgcgt
caacagctgcatcctctgccggtgtccttgccgccgccgccactcgacctccttcaaaca
cccgattttcctgatttttcatcaactactcaaggaagccgcatcagaagcttccctcat
gttgaaggaaattatgcacttcatgtttacatcccagttctcataccaacaccaattagg
acgcaactatccatttttataaaacaaattgcatctctagttcctggactttttgctgtt
gattgtgacttccctattgctgagttatgcaaagacaatgcaaaactagagcaaattctc
ttaggaagagaattccatattagcttgggaagaacagttcctattcaagcacatcaaatt
gagtctattgtggctatgcttcgtcaaaggttccaatcacagagaaggtactttatagat
ttcaataagtgggatgtctttgtcaatgatgagcaaacacgctctttccttgcgcttgaa
gttataggtgctggtctttcagagatatccaagcagattagacttgtagacgtgatatat
agattacatggtctccctgagttttataagaacccacggccccacatatccttgctatgg
ggtttaggagagacaagcggcatgctaaaccaagcggttgaaaaaattgaaagatcctcc
aagaattcaagcctgccgtgtcggcatatctttacttgcaagatcaacggcattgaatgt
agaatagcttctatgagcgcattcatcttcgtacgagcgggcgtagcgtga

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