Zingiber officinale (ginger): 122053132
Help
Entry
122053132 CDS
T08725
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122053132
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122053132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_SKP2
LRR_FBXL15
LRR_6
LRR_4
LRR_At5g56370
LRR_8
LRR_NXF1-5
LRR_At1g61320_AtMIF1
F-box_5
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
122053132
NCBI-ProteinID:
XP_042470964
LinkDB
All DBs
Position
3A:160826107..160829289
Genome browser
AA seq
585 aa
AA seq
DB search
MVSVPRGDAEATMNRPRPCDSDMSTVFSLDLLANILDRVSDPRDRKSCRLVCHGFLRAEE
IHRRSLRVLRLEVLPGLLRRYAAGLECLDLSACPALDDRAFSAALAAGAGQWRLRSVSLS
RASGVGWRGLVALVDACPRLEAVDLSHCVGVGDREAAALANAAGLRELRLDKCLGLTDVG
LAKVAVGCAGLEKLGIKWCLEISDIGIDLLAKKCQDLKELDISYLKISNRSINSISSLGK
LEVLNMVGCSFVDDEGLQFLKHRNNSLRSINISRCENVTSSGLTSVIEGNSGLQKLNVGD
CFPELASLFFSKLNDLKDSLTVLKLDGFQVSASSLKIIGLNCKNLAKIGLSKCQSVTDEG
IFELVANCVHLTTIDLTCCHLLTDRALISIGDQCKKLRCLRLESCNLITDKGLECIGTCC
SSLEEIDLTDCSLSSTAMKYLSQCSKLVVLKLGLCYMISDEGLVLLASNCKKLRELDLYR
CVEITDDGLAAIAAGCKKIQKLNLCYCTKITDGGLRHVSRLEELRDLELRGLCHVTSSGI
AKIAMGCRHLSELDLKRCNLVDDGGLFALAQYTENLRQARVYVCC
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgtgccccgaggagatgctgaagcgacgatgaacagaccgcgtccctgcgat
tccgacatgtcaaccgtgttctccctcgacctgctcgccaacatcctcgaccgcgtctcc
gatccccgcgaccgcaagtcctgccgccttgtctgccacgggttccttcgggccgaggag
atccaccgccgctcgctccgcgtcctccgcctcgaggtcctacctggtctccttcgccgc
tacgccgctggactcgagtgcctcgatctctctgcttgtccggccctcgacgaccgcgcc
ttctctgctgccctcgctgctggggcgggccagtggcggcttcggtccgtcagccttagc
cgcgccagcggcgttgggtggcggggcttggtggctctcgtggatgcgtgcccgcgcctg
gaggctgtggacctgtcacactgtgtcggcgtcggggatcgggaggccgccgccttggcg
aacgccgccgggttgagggagctccgattggataaatgcctcgggctgacggatgtcggg
ctcgctaaggtggcggtgggctgcgccgggctagagaagctcggaatcaagtggtgtctg
gagatctccgacattgggatcgatctgctcgctaagaagtgccaggatcttaaggaattg
gacatctcatatctgaagatatccaatagatcgatcaactccatttcctctcttggcaag
ctggaagttctgaacatggtaggatgctcttttgtagacgacgagggattacaatttctg
aagcaccgaaacaattcattgcggagcattaatatctctcgctgtgaaaatgtaacttct
agtggcttaacctcagtgattgaaggaaacagtggtcttcaaaaactcaatgttggagat
tgttttcctgagctggcatctctcttcttctccaagttgaatgatttgaaggatagcttg
accgtactaaaacttgatggctttcaagtttctgcatcaagtcttaagataattggcctc
aactgcaagaatttggccaagatagggcttagtaaatgccaatcagtgaccgatgaaggg
atctttgagcttgtagccaactgcgttcatttaacaaccattgatcttacatgctgtcat
ctgcttacggacagggcccttatatctataggagatcaatgtaaaaagctgcgatgcctc
cgactagaatcctgcaatttaattactgataagggtctagaatgtatcggaacatgttgc
tctagtcttgaagaaatcgacctcactgattgtagtctaagcagtactgcgatgaagtat
ctatctcagtgttcaaagctggtagtcttgaaactgggtctttgttatatgatttccgat
gaaggccttgttcttctagcatcaaactgcaaaaagcttcgcgaacttgatctataccgg
tgtgttgagatcactgatgatggtttagctgccatagcggctggctgcaagaagatacaa
aagttaaacctctgctactgcacgaagatcactgatggaggactgaggcatgtaagtcgt
ttggaagaacttcgtgatcttgaactgagaggtttatgtcatgttacaagctcaggcata
gcaaaaatcgccatgggttgtcggcacctttctgagctggatttgaaacgctgcaatttg
gtagatgatggaggtctatttgctcttgcccaatatactgaaaacctcagacaggcacgg
gtctatgtatgttgctag
DBGET
integrated database retrieval system
