Zingiber officinale (ginger): 122053177
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Entry
122053177 CDS
T08725
Name
(RefSeq) SEC1 family transport protein SLY1-like
KO
K19998
sec1 family domain-containing protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122053177
Membrane trafficking [BR:
zof04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
122053177
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122053177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
122053177
NCBI-ProteinID:
XP_042471037
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All DBs
Position
3A:162073696..162078859
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AA seq
626 aa
AA seq
DB search
MALNLRQKQTNFIVRMLNLNQTITPGGAGGMSSASAPAEEVYKILIMDAFCRVVLSPLIR
VNDLRKHGVTLYFSIDKERQKVPDVPAVYFVRPTPENVERIAADAARGLYDAFHLNFSSS
LPRPLLEDLARRTLEMDSVHRISKVYDQYLEFVSLEDGLFSLAQPKTYVQINDPSAGDRE
IEDLVEKIVSGLFCVLATLGVVPVIRCARGGPAEMVASALDARLRDHLVTRNNLFTEGGN
LTSSFQRPILCLFDRNFELSVGIQHDWSYRPLVHDVLGLKLNRVTMPAEKGAAKSCELDD
SDPFWVANSWSPFEKVAEEIETQLSKYKQDVDEVNRRTGGKDGVEFDGTDLIGNTKHLMN
AVNSLPELTERKKVIDKHTNIATVLLGEIKARSLDAYCTLETDMLSKGSVDRSSLLSLLR
GKGTKVDKLRVAITYLLSLETTPQSELESIEAALRESEVDTRAFHYVKKVKSLNTSLTAS
ASSASRSNIVDWAEKLYGQSISAVTAGMKNLLSGGRQLALTRIVEALMEGKPNPEVDSYL
IFDPRAPKTGPGAQLKGPFKEAIVFMIGGGNYVEYRSLMELAQRSQPVKHVIYGTTEILN
GIEFVEQLTELGQKMGLGNAGGPTAQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatcttcggcagaagcaaactaatttcattgtccggatgctgaatctgaac
cagacgataactcctggcggcgccggtgggatgtcgtccgcgtccgcccccgccgaggag
gtctacaagatcctcatcatggacgccttctgccgcgtcgtcttgtccccgctgatacgt
gtcaacgacctccggaagcacggcgtcactctctatttcagcatcgacaaggagcgccag
aaagtccccgacgtgcccgctgtctacttcgtccgccctactcccgaaaacgtcgagcgg
atcgctgctgatgcggctcgtggcctctacgacgctttccatctcaatttctcatcctct
cttcctcgcccgctgctcgaggatctcgctcggaggaccctcgagatggattctgttcac
cggatctcgaaggtatacgatcagtatcttgagttcgtgtctctggaggatggtctcttc
tcgctcgcccagccgaagacctacgtccagattaacgatccctcagcgggagatcgtgag
attgaggacctcgtggagaagatagtcagcggattattttgcgtccttgccacgctggga
gttgttccggtgatccggtgtgctcgtggtggtcctgctgagatggtcgcgtccgctttg
gatgctcgtcttcgtgatcatctggtcacaagaaacaaccttttcacagagggcggaaat
cttactagctccttccagcgcccaatcctctgtttgtttgatcggaatttcgagctgtct
gttgggatccaacacgactggagctaccgtccactggttcatgatgtgcttggattgaag
ctgaatagggtgacaatgcctgcagaaaagggtgcagcaaagtcgtgtgaattggatgac
tccgatccgttttgggttgccaacagctggtctccatttgagaaggtggcagaggaaata
gagacccaattgagcaagtacaagcaggatgttgatgaggtgaataggcgaactggggga
aaggatggtgttgagtttgatgggactgatctgattggtaataccaagcatttgatgaat
gcagttaactcacttcctgagctgactgaaaggaagaaggtgatcgacaaacacacaaac
atcgccactgttcttttgggtgaaatcaaagcaaggtccttggatgcttactgcactctt
gaaactgacatgctgagcaagggaagtgtggatagaagttctttgctcagtcttctcaga
gggaaaggtaccaaggtagataagcttcgtgttgcaataacctatcttctttctttggaa
acaacaccacaatctgaattggagtcaatagaagcagcattgagggagtctgaggtcgat
acacgtgcctttcactatgtgaagaaggtaaagtccttgaatacatccttgactgcctca
gcgagctctgctagcaggagtaacattgtggattgggcagaaaagctctatgggcagtcc
atcagtgctgtaaccgcaggtatgaagaatctattgtcaggagggaggcagctggctcta
acaaggatagtggaggctttgatggaagggaagccaaatccagaggttgattcttacctt
atatttgatccaagagcccccaaaacaggtcctggagcacagttgaagggaccctttaag
gaggcaattgttttcatgataggtggagggaattatgtagaatacaggagtttaatggag
ctggcacaacgctcgcagccagtgaaacatgtgatatatggaactacagaaattcttaat
gggattgaatttgttgaacaacttacagagttaggacaaaaaatgggtctaggaaacgct
ggaggcccaactgcccaatga
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