KEGG   Zingiber officinale (ginger): 122053200
Entry
122053200         CDS       T08725                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03020  RNA polymerase
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122053200
  09124 Replication and repair
   03420 Nucleotide excision repair
    122053200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    122053200
   03400 DNA repair and recombination proteins [BR:zof03400]
    122053200
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122053200
  RNA polymerase III system
   RNA polymerase III
     122053200
  RNA polymerase I system
   RNA polymerase I
     122053200
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122053200
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 122053200
NCBI-ProteinID: XP_042471075
LinkDB
Position
3A:162315772..162318242
AA seq 203 aa
MDESATRLFRIRHTVMQMLNDRGYLVAEAEINMAKKAFLHKFGEGVKREDLFISKSKRND
PGEQIYVFFPNDEKVGMKHIKKYVEVMKSENVPRAMLVLQQNLTPFAKSYLLELSSKFHL
EVFQEAELLVNIKEHVLVPEHQVLTTEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR
GQVVKIIRSSETAGRYVTYRYVV
NT seq 612 nt   +upstreamnt  +downstreamnt
atggatgaatctgcaacccgtcttttccgtatccgacatacggttatgcagatgttgaac
gatcgtgggtatcttgtagctgaagcggagattaacatggccaagaaagctttccttcac
aagtttggtgagggcgtgaagcgcgaggatctcttcattagcaagtccaaaaggaacgac
cccggcgagcagatatatgttttctttcccaacgatgaaaaggtcggcatgaagcacatt
aagaagtatgttgaagtgatgaaatcagagaatgtacctagagcgatgctagttcttcag
caaaatctgactccatttgcaaaatcgtatcttctggaactgtcatcaaaatttcatttg
gaggtttttcaggaggctgagttgctggtgaatataaaggaacatgtactagttccagag
catcaagttcttactactgaagagaagaagactttgttagagcggtacactctgaaggaa
actcagcttcctcgaattcaaataactgatccaattgcaagatactacggtctcaagcga
ggacaagtggttaaaatcattcggtccagtgagacggccgggcgatatgtgacctacagg
tatgttgtctag

DBGET integrated database retrieval system