Zingiber officinale (ginger): 122053316
Help
Entry
122053316 CDS
T08725
Name
(RefSeq) deoxycytidylate deaminase isoform X1
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00240
Pyrimidine metabolism
zof01100
Metabolic pathways
zof01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
122053316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
zof02044
]
122053316
Enzymes [BR:
zof01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
122053316
Secretion system [BR:
zof02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
122053316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-GeneID:
122053316
NCBI-ProteinID:
XP_042471253
LinkDB
All DBs
Position
3A:complement(163763250..163767302)
Genome browser
AA seq
230 aa
AA seq
DB search
MSARDLVLLSVSVTIGAVASFVACRFVSSRCNDDDEKLTAVYPPLPDVNRSSDGVLPRNP
FDTSKREGYISWDDYFMAIAFLSAQRSKDPNRQVGACLVSQDDIILGIGYNGFPRRCSDD
KLPWAKKSKTGDPLETKYLYVVHAEVNAILNTNHASAEGQKLYVTMFPCNECAKIIIQSG
VSEVIYYTDKRVGNSDAAYIASNKLLALAGVKLRKHQPQMTQILVEFQEP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagagacttggttctactctcggtctccgttaccatcggagccgtggcctcc
ttcgttgcctgcaggttcgtctcctcccgctgcaacgatgacgatgagaagctgacggcg
gtctatcctccccttcccgacgtcaatcgatcgtctgacggcgtcttgcctcggaatccc
ttcgatacttccaagcgcgaagggtacattagctgggatgattatttcatggcgattgct
tttctatctgctcaacgttccaaagatcccaacaggcaggtcggagcatgcctggttagt
caagatgatataatccttggaattggctacaatggatttccaagacgatgttctgatgac
aagcttccttgggcaaagaaatctaaaaccggtgatccactggagacgaagtacctttat
gttgttcatgctgaagtaaatgctattttaaatacaaaccatgcatctgctgagggacag
aaattgtatgttacaatgttcccttgcaatgaatgcgcgaaaattattatacagtctggg
gtttctgaagtcatctattatactgacaaaagagtcggcaattccgatgcagcatatatt
gcctcgaacaagttgctagctttggctggtgttaagttgaggaagcaccaaccacaaatg
acacagattttagttgagtttcaggaaccttag
DBGET
integrated database retrieval system
