Zingiber officinale (ginger): 122053342
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Entry
122053342 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122053342
04121 Ubiquitin system [BR:
zof04121
]
122053342
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122053342
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122053342
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122053342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
122053342
NCBI-ProteinID:
XP_042471290
LinkDB
All DBs
Position
3A:complement(164351567..164353797)
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AA seq
353 aa
AA seq
DB search
MNEAPGGRCWCHACRRVVNPVMEPEVKCPLCDGGFVEEIERGGLTDSDSVRSDRSFSLWA
PILLEMLGDSSRQSRSRRYEEDEDSDQDHEFEDFIRRRRRRSAIIQLLQSFQDDQRSEGG
NLEREVDREIERNRDTERERDRENLILINPFSQTIILRESFDAASTEGRESNNGISSAEF
GDYYVGSALDVLLYHLAENDPNRYGTPPAKKEAVDALPTVKIEKALGCSVCLDDFEIGMD
AKEMPCKHRFHSDCILPWLELHSSCPVCRAQLPVDESKVSNASSNGTAMEVSDGGGGDER
GDRGDDNRLWVPVSWPFAGLFSLSGSQNSANSSSNATASSSNSENSNSHREEN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagccccaggtggaagatgctggtgccatgcctgccgtcgagtagtaaatccg
gtcatggaaccggaagtcaagtgccccctttgtgatggggggtttgtcgaagagatagag
agagggggactcactgattctgactctgtcagatccgatcggtccttctcactttgggct
ccaatcttactagagatgctgggcgattcttctcggcaatcaaggtctagaagatacgag
gaagatgaggactcggatcaggaccacgagttcgaagatttcataaggagacgccgtcgg
agatctgccattatccagttgcttcagagctttcaggatgatcagaggtcagagggaggt
aacctagagcgtgaagtggatagggaaattgaaaggaatagagatacagaaagggaaagg
gatagagagaatctaattctcatcaaccctttcagccagactataatccttcgagaatcc
ttcgacgcggcgagtaccgaaggccgggaatccaataacggaatctccagtgcagaattt
ggtgattactacgttggatctgcattggatgttcttttgtatcatttagctgagaatgat
cccaacaggtatggcactccaccagctaagaaagaggcagtagatgccttgcccacggtg
aaaattgagaaagctctgggctgttctgtctgtcttgacgactttgagatcggtatggat
gcgaaagagatgccttgcaaacataggttccacagtgactgcatcttgccatggctggaa
ctccacagttcatgcccggtttgtcgcgctcagttgcctgttgatgaatcaaaggtttca
aatgcgtctagtaacggaactgcaatggaggttagtgatggtggcggtggcgacgagaga
ggtgatagaggagatgacaaccgactctgggtccctgtctcttggcctttcgctgggctc
ttctctttatcaggttctcagaacagtgccaactcatcctcaaatgcaacagcatcgtct
tctaactctgaaaatagtaattctcatcgcgaggagaactga
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