Zingiber officinale (ginger): 122053810
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Entry
122053810 CDS
T08725
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K27740
protein auxin signaling F-box 2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122053810
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
HcyBio
Motif
Other DBs
NCBI-GeneID:
122053810
NCBI-ProteinID:
XP_042471702
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Position
1B:complement(27351500..27354680)
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AA seq
575 aa
AA seq
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MTYFPDEVVEHIFDFLSSHRDRNNVSTVCKAWYLVEQLSRLRVFVGNCYAVRPERVMARF
PGMKCLTVKGKPHFADFNLVPHDWGGDALPWIETAARCCPGLEELRLKRMVVSDESLELL
ARAFPNFKSLVLISCEGFSTDGLAEIATHCRGLRELDLQENEVEDHGRQWLSCFPDSCTS
LVSLNFACLKGEVNTSALERLVARCQNLRCLKLNRAISIESLIKILARAPNLVELGTGSF
TADHRTEAYQNLLNAFYKCNSIRNLSGFWDAAPRCLQAIYSICSSLTVLNLSYAPAIQVN
DLIKMIRHCFKLQKLWVLDSIGDKGLAAVACACKELQELRVFPSDVYGTGIAAVTEEGLV
AISSGCPKLNSLLYFCHQMTNAALITVAKNCPHFTRFRLCILDPVKPDPISNEPLDEGFG
AIVKSCKDLKRLSLSGLLTDKVFLYIGMYASRLEMLSIAFAGESDKGMVYVLNGCKNLKK
LEIRDSPFGDAALLENVGKYETMRSLWMSSCDVTQGGCKALAAKMPRLNVEVINEREESD
EMVENPSDMHRVEKMYVYRTLTGPRDDAPDFVWTF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacttacttcccggatgaggtggtggagcacatctttgacttcctcagctcgcatcga
gaccgtaataatgtatccacagtgtgcaaggcgtggtatcttgtggagcagcttagccgc
ttgcgcgtattcgtcggcaactgttatgccgtccggcctgaacgagtaatggctagattc
cctggaatgaagtgcctcaccgtcaaggggaagccccattttgctgatttcaacctggtt
ccccacgattggggcggtgatgcgctaccgtggattgagacggctgcacgttgttgccct
ggtttggaggagctccgactgaagaggatggtggtctcggatgaaagcctggagcttcta
gcccgcgctttccccaacttcaagtcgcttgttctaattagctgcgagggtttcagcact
gatgggcttgctgagatcgctactcactgcaggggtcttagggagttagatttacaggaa
aatgaagtggaagatcatggccggcagtggctaagttgtttccctgattcttgtacttcc
ttagtatctctaaacttcgcatgtctaaaaggagaggtgaatacaagtgcccttgagcga
cttgttgctaggtgccagaacctcagatgcttgaagcttaatcgagcaatatctattgag
tcacttatcaagatacttgcccgagcccccaatttggtggaacttggaactggttctttc
acagctgaccaccgcactgaagcttatcagaatctattaaatgccttctataaatgcaat
tctataaggaatttgtcaggtttctgggatgctgctcctcgctgcctgcaggccatatat
tccatctgttcaagccttactgtccttaacttaagctatgcccctgcaatccaggttaat
gatctaataaagatgattcgtcactgtttcaaacttcaaaaactctgggttttagattca
attggagacaaaggcttagcagccgttgcctgtgcttgtaaagagttacaggagttgagg
gtatttccatcggacgtatatggtactggcattgctgctgtaactgaagaagggcttgtt
gctatatcctcaggttgccctaagttgaactctttactgtatttctgccaccagatgaca
aatgctgcacttatcacagttgccaagaactgcccgcatttcacgcggttcagattgtgt
attcttgatcctgtaaagccagatcccatcagtaacgaaccattggatgaaggttttggg
gcaattgtgaagtcatgcaaagatctgaagagactatcattatcaggccttctaactgac
aaggttttcttgtatataggcatgtatgcttcgcgtcttgagatgctttcaattgcattt
gctggtgaaagcgataaaggaatggtctatgtgctcaatggatgcaagaaccttaaaaag
cttgaaatcagagacagtccatttggtgatgctgcacttttggagaatgtagggaagtat
gaaacaatgcgatccctttggatgtcatcttgtgatgttacccaagggggctgcaaggca
ctcgctgcaaagatgccaagattaaacgttgaagtcataaacgagagggaagaaagtgat
gagatggtggaaaatcctagtgacatgcacagagtggaaaagatgtatgtgtatcgaact
ctgacagggccaagggacgatgcaccagattttgtctggacattttag
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