KEGG   Zingiber officinale (ginger): 122054135
Entry
122054135         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122054135
   04120 Ubiquitin mediated proteolysis
    122054135
  09126 Chromosome
   03083 Polycomb repressive complex
    122054135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122054135
   04121 Ubiquitin system [BR:zof04121]
    122054135
   03036 Chromosome and associated proteins [BR:zof03036]
    122054135
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122054135
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122054135
   Cul7 complex
     122054135
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122054135
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122054135
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 122054135
NCBI-ProteinID: XP_042471889
LinkDB
Position
3A:complement(152331154..152334403)
AA seq 163 aa
MALDGQKKVTLLSSDGEGFEADEAAAVQSQTIRHMIEDGCAHSSIPLPNVTSQILAKVIE
YCNRRVDAYGSNGQDGAAEGVEDEGFKAWEAEFVKVDQPTLFDLILAANYLDIKPLLDLT
CQSVADMIKGKTPEEIRRSFNIKNDFTPEEEEEIRRENQWAFE
NT seq 492 nt   +upstreamnt  +downstreamnt
atggcgttggacggccagaagaaggtaaccctgttgagctcggacggagaggggttcgag
gccgatgaggcggcggctgtgcagtcgcagaccatacgccacatgatcgaggacggctgc
gcccatagcagcattcctctccccaatgtcacctctcagatactcgccaaggtgatcgag
tactgcaacaggcgcgtcgacgcttacggcagtaacggccaagatggcgccgccgagggc
gtggaggacgaagggttcaaggcctgggaagcggagttcgtgaaggtcgaccagcctacc
ctcttcgacctcatcctggcagcaaactatctggacatcaaaccgttgctagatctgact
tgccaaagtgttgcagatatgattaagggcaaaactccagaagaaattcgcaggtctttc
aatataaagaatgactttacacctgaagaagaagaagagatccgcagagagaaccagtgg
gcctttgagtga

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