Zingiber officinale (ginger): 122054135
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Entry
122054135 CDS
T08725
Name
(RefSeq) SKP1-like protein 1A
KO
K03094
S-phase kinase-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122054135
04120 Ubiquitin mediated proteolysis
122054135
09126 Chromosome
03083 Polycomb repressive complex
122054135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122054135
04121 Ubiquitin system [BR:
zof04121
]
122054135
03036 Chromosome and associated proteins [BR:
zof03036
]
122054135
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122054135
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122054135
Cul7 complex
122054135
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122054135
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122054135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
122054135
NCBI-ProteinID:
XP_042471889
LinkDB
All DBs
Position
3A:complement(152331154..152334403)
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AA seq
163 aa
AA seq
DB search
MALDGQKKVTLLSSDGEGFEADEAAAVQSQTIRHMIEDGCAHSSIPLPNVTSQILAKVIE
YCNRRVDAYGSNGQDGAAEGVEDEGFKAWEAEFVKVDQPTLFDLILAANYLDIKPLLDLT
CQSVADMIKGKTPEEIRRSFNIKNDFTPEEEEEIRRENQWAFE
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggacggccagaagaaggtaaccctgttgagctcggacggagaggggttcgag
gccgatgaggcggcggctgtgcagtcgcagaccatacgccacatgatcgaggacggctgc
gcccatagcagcattcctctccccaatgtcacctctcagatactcgccaaggtgatcgag
tactgcaacaggcgcgtcgacgcttacggcagtaacggccaagatggcgccgccgagggc
gtggaggacgaagggttcaaggcctgggaagcggagttcgtgaaggtcgaccagcctacc
ctcttcgacctcatcctggcagcaaactatctggacatcaaaccgttgctagatctgact
tgccaaagtgttgcagatatgattaagggcaaaactccagaagaaattcgcaggtctttc
aatataaagaatgactttacacctgaagaagaagaagagatccgcagagagaaccagtgg
gcctttgagtga
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integrated database retrieval system