KEGG   Zingiber officinale (ginger): 122054141
Entry
122054141         CDS       T08725                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03020  RNA polymerase
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122054141
  09124 Replication and repair
   03420 Nucleotide excision repair
    122054141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    122054141
   03400 DNA repair and recombination proteins [BR:zof03400]
    122054141
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122054141
  RNA polymerase III system
   RNA polymerase III
     122054141
  RNA polymerase I system
   RNA polymerase I
     122054141
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122054141
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 OrfB_Zn_ribbon zinc_ribbon_13 HypA zf-ribbon_3 zinc_ribbon_10 DUF1451
Other DBs
NCBI-GeneID: 122054141
NCBI-ProteinID: XP_042471899
LinkDB
Position
3A:complement(153375160..153378272)
AA seq 52 aa
MDPLQPEPVSYICGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatcctctgcagcctgagcctgttagttacatatgtggagattgcggagcagagaac
acattgaagccaggggatgtcatacagtgcagagagtgcggataccgcatcctttacaag
aagcgcactcgtagaattgtgcaatatgaagctcgttga

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