Zingiber officinale (ginger): 122054237
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Entry
122054237 CDS
T08725
Name
(RefSeq) MADS-box transcription factor 16-like
KO
K09264
MADS-box transcription factor, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122054237
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
122054237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
FUT8_N_cat
SmpB
Sec8_N
Vps54_N
MutS_III
L31
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
122054237
NCBI-ProteinID:
XP_042471982
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Position
3A:164725899..164728019
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AA seq
218 aa
AA seq
DB search
MGRGKIEIKKIENPTNRQVTYSKRRSGIMKKARELTVLCDAEVSIIMFSSTGKFSDYCSP
STNTKSIFDRYQQVSGIDLWSAQYERMQNNLSRLKEINRKLRREIRQRMGEDLDGMDIKE
LRGLEQNLDEALKVVRNRKYHVISTQTETYKKKVKNSQEAHKNLLHQLEMKDEHGGVYLC
VEDDGVLAHPMYSYRVQPNQPNLQAIRSYASHHDLRLA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggaagattgagataaagaagatagagaacccaactaataggcaggtgact
tattccaagaggaggtcagggatcatgaagaaggcgagggagctcaccgtgctgtgcgat
gctgaggtctccatcatcatgttctccagcaccggcaagttctctgattactgcagccct
tccactaacaccaaaagtatctttgatcgttatcaacaagtgtcagggatcgacttgtgg
agtgcacaatatgagagaatgcaaaataatctgagccgtctcaaagagatcaaccgtaaa
ctccgcagagaaataaggcaaaggatgggtgaagatcttgatgggatggacattaaggaa
ctgcgcggtcttgagcaaaatctagatgaggcattgaaggttgttcgcaatagaaaatat
catgtgatcagcactcaaacagaaacctacaagaagaaggtgaagaactcccaagaagct
cacaagaatttactgcatcaattggagatgaaagatgaacatggaggtgtttacctgtgc
gtggaggatgatggagtgcttgctcatcccatgtactcctacagggttcaacccaatcaa
ccaaaccttcaggccatcagatcatatgcctctcatcatgatctacgtcttgcttga
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