KEGG T08725: 122054275

Zingiber officinale (ginger): 122054275

Entry

122054275         CDS       T08725

Name

(RefSeq) E3 ubiquitin-protein ligase ATL4-like

K10663

E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]

Organism

zof Zingiber officinale (ginger)

Brite

KEGG Orthology (KO) [BR:zof00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122054275
Enzymes [BR:zof01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122054275
Ubiquitin system [BR:zof04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    122054275

SSDB

Motif

Pfam:

zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-RING_UBOX zf-C2H2_ZFAND2 zf_RING_Vps8_fungal zf-C3HC4_3 CR_prot_dom_plant zf-RING_16 zf-C3H2C3

Other DBs

NCBI-GeneID:

122054275

NCBI-ProteinID:

XP_042471996

LinkDB

Position

1B:complement(41857513..41858883)

AA seq 361 aa
MASPSSMARPPPSAPPSQRPLKHLPPAEEVFTEDTSSSASLSHNPSLLIISAIIAFVFIA
SAFIHLLLRLLSSRLRSSSVAAAPPPPPLPPPPPLPLPRRSDSHSSAADSGFSDKDKAAL
VDSLPLFSLASSLSVLPKSSPDCAVCLCPFRPHDELRLLPACRHAFHSQCVDPWLRSAPS
CPLCRASIALPAAPLPSSPPQPPPQDPSTTGSFRVEIGSVSRRGMTSEADLTAGNHPRHL
RTFSLGPSLEYIVDEEVEAVVAWIPRRTGKEEKRGASAEPDPLHPAAEAAGGGGRGWLRD
HVDRLASSASSTLSSLQFSGRWSHRYDGGEGGRWSRDLEGSARREAEEGGYYDFYRWLVG
A

NT seq 1086 nt +upstreamnt +downstreamnt
atggcttctccctcctcgatggcacgtccgccgccgtctgctcctccttcacagcgtccc
ctcaaacaccttcctccggcggaggaagtctttaccgaagacaccagcagctccgcctct
ttatcccacaaccccagtctcctaatcatctccgccattatcgccttcgtcttcatcgcc
tccgccttcattcacctcctcctccgcctcctctcctcccgcctccgcagctcttccgtc
gccgcagcaccccctccgccgccgctgcctccgccgccgcctctgccactcccgaggcga
tctgactcccattcctccgcagctgactccggcttctccgacaaagacaaggcggctctg
gtcgattcgcttccgctgttctccctcgcgtcctccctctccgtcctacccaaatcctcc
ccggattgcgccgtctgcctctgccccttccgcccgcacgacgagctccgcctcctcccg
gcctgccgccacgcattccattcccaatgcgtcgatccctggctccgatccgccccatct
tgcccgctctgccgcgcctctattgccctcccggccgcacccctgccgtcgtcgccgccg
cagccgccgccccaagatccctcaacgaccggaagcttccgtgtcgaaatcggaagcgtc
agtcggagggggatgacgtcggaggcggatctgaccgccgggaaccatccgcggcacctg
cggacgttctcactagggccgtcgctcgagtacattgtggacgaggaagtggaagcagtg
gtggcgtggattccgaggcggacggggaaggaagagaagcggggagcgtcggccgagccg
gatcccctgcatccagccgcggaggcggcagggggaggagggagagggtggctgagggat
cacgtggacaggttagcctcctcggcttcgtccaccttatcgtcgctgcagttctccggg
cggtggagccaccgttacgacggcggcgagggaggacggtggtcgcgggatctggaaggg
agcgcgcggcgggaggcggaggagggcggctactacgacttctacaggtggctggtaggg
gcataa

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