Zingiber officinale (ginger): 122054772
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Entry
122054772 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122054772
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122054772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
PDF2_C
Zn_ribbon_3
Motif
Other DBs
NCBI-GeneID:
122054772
NCBI-ProteinID:
XP_042472141
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Position
3B:complement(25613534..25615192)
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AA seq
450 aa
AA seq
DB search
MEHEDNLRLKEENTQLLTENVKLKGALRTIRCSNCGQPPTLDEMSIDELVLENAGMREKG
GFCKKKMDWFDSQIEMVMGLIAKYTSRPLRTPSVLLEPPVAELNLILSRKGPETEQTAAH
VLAVVAMEELLAMAQREAPLWIPGKAGLGEALNEEEYARAFPGGLGPRFAGLGIEASRAT
AIIAMDAVRLVDILMDVSKWSAFFSSIVAGATYITGYSFGTGESYDGSLQLITAELQAPS
PLVALREGLFLRHCKLHGEGLWAVVDVSFEVSPDATMTKFRRRPSGCIIQQLPDDRSKVI
WIEHVEVEAGGIHDMYKPIVNSGLVFGAKRWLETLSKQCERMASLMASNSTAPIVGDDAV
ATKNILKLSDRMVVCFFSGVSGSVLHQWADRRNVGMNDVKIRGRKNNGDPGRPTGIVLSA
STSIWLPIPPKRVFDFLRDVPSRNQVFRAQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgaggataacttaaggctgaaagaagagaacacacaacttttaactgaaaat
gtgaagctgaaaggggcactacgtaccattcgctgctccaattgcggccaacctcccaca
cttgacgagatgagcatcgacgaactcgtacttgaaaatgctggtatgcgggagaagggg
ggcttttgtaaaaaaaaaatggactggtttgattcacagatcgagatggtgatgggcctg
attgcaaaatacacaagtcgaccgttgaggacgccctccgtgctgctcgagccgccggtg
gccgaactgaatttgattctgagccggaagggaccggagactgaacaaacggcggcgcac
gtgttggctgtggtggccatggaggagcttctcgcgatggctcagcgggaggcgccgctg
tggattccaggcaaagctgggctcggcgaagcattgaacgaggaagaatacgcccgggcc
ttccccggtgggctcggccccaggttcgcaggcctcggcatcgaggccagcagggccact
gcgattatcgccatggacgccgtcagattggtcgacatactaatggacgtgagtaaatgg
agcgcgttcttctccagcatcgtcgccggcgctacttacataacgggctattcattcgga
acaggagaaagctatgacggctctctgcaactgattactgctgagctccaagctccaagc
cccttggtggctctcagagaggggttgttcctgaggcactgcaagctgcatggcgaaggg
ctctgggcggtggttgatgtttcctttgaagtgtcccccgacgccaccatgactaagttt
cgcagaaggccctccggatgcatcattcagcaactgccagacgatcgctcaaaagtcata
tggattgagcatgtggaggtggaagccggaggcattcatgacatgtacaagcccatcgtc
aactctggtctggtatttggagcaaagagatggctggagacgctgtcaaagcaatgcgag
agaatggctagtctcatggccagcaattccactgctcctatagtaggagacgacgccgta
gcgaccaagaacatactgaagttatcggacaggatggtggtgtgctttttcagcggtgtg
agcggctctgtgcttcaccagtgggcagatagacgtaatgtgggtatgaatgatgtgaag
attagaggcaggaagaacaatggcgatccagggaggcctactggcattgttcttagtgca
agcacttcgatctggctcccaatccctccaaagagagtttttgatttcctccgcgatgtg
ccctctcgtaaccaggtattcagagcccagtaa
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