KEGG   Zingiber officinale (ginger): 122055139
Entry
122055139         CDS       T08725                                 
Name
(RefSeq) flap endonuclease 1-A-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03030  DNA replication
zof03410  Base excision repair
zof03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122055139
   03410 Base excision repair
    122055139
   03450 Non-homologous end-joining
    122055139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    122055139
   03400 DNA repair and recombination proteins [BR:zof03400]
    122055139
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122055139
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122055139
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122055139
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122055139
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122055139
SSDB
Motif
Pfam: XPG_I XPG_N
Other DBs
NCBI-GeneID: 122055139
NCBI-ProteinID: XP_042472455
LinkDB
Position
3B:115716314..115718094
AA seq 232 aa
MQSVSQAKLLCNLFPLVNGDLEKKCAYSDSRGLPGIRKEFADHLQAMFNRTIRLLEAGIE
PVYVFDGQPPELKKQELAKRYLKRKDATNDLNTTIEAGDLEGIEKYCKRTVKVTKQHNED
CKRLLRLMGVPTIEAPCEAEAQCAALCKSDKVFAVASENMDTLTFGVPRFLHHLMDPSSK
KISVMEFDISKVLEELRLTMDQFIDLCILSGCDYCDNIKGKLSYEILYIQQV
NT seq 699 nt   +upstreamnt  +downstreamnt
atgcagtctgtttctcaagctaaactgctttgcaacttgtttcctcttgttaacggtgat
ctggaaaagaaatgtgcatatagtgattctcgaggacttcctggaattaggaaagaattt
gcagatcatttgcaagcgatgttcaatcgaactatcagattattagaagcaggtatcgag
ccagtatatgtatttgacggtcaacctccagagttgaagaaacaagaacttgccaaaaga
tatttaaagaggaaagatgcaactaacgatctgaacacaacaattgaggctggtgatttg
gagggaattgaaaagtactgcaaaaggactgtcaaggtaaccaagcaacataatgaagat
tgtaaacgtctcttaagactaatgggtgtgcctactattgaggcaccttgtgaagcagaa
gctcaatgcgcagctctttgcaaaagtgacaaggtgtttgcggttgcctcagaaaacatg
gatactttaacttttggggtaccaaggtttctccatcatttaatggatcctagttccaaa
aaaatctctgtgatggaatttgacatttcaaaggttcttgaagagctaagactcactatg
gatcagttcattgatttgtgtattctctctggatgtgattattgtgataacattaaaggt
aaactttcttatgagatattgtacattcaacaagtttaa

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