Zingiber officinale (ginger): 122055141
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Entry
122055141 CDS
T08725
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like
KO
K14016
ubiquitin fusion degradation protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122055141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122055141
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122055141
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
DUF3443
Motif
Other DBs
NCBI-GeneID:
122055141
NCBI-ProteinID:
XP_042472458
LinkDB
All DBs
Position
3B:116173642..116177855
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AA seq
384 aa
AA seq
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MASNRLDKEEGAILGYSVFQYLQYAKARRYAHTRANLRKFLEQFGKQLREIGSIVEREIF
GHKYFEGYDYHDHSFEHNYRCYPASLIEKPHLEAGGKLIMPASALHYLSYLDIDYPMQFE
LSNVAANRSSHSGVLEFTAEEGLIYMPHWMMENLLLKVGDTVHVRNASLPMGTYVKMQPH
TKDFLDISNPKAILETTLRTFSCLTTGDSIMVSYNKKKYYIDIVETKPSFAISIVETDCE
VEFAPPLDCKEPERQETPVLRSKAPAEVGEAQVEEEVDHKFTPFTGTGRRLDDNTPKDRA
STSASTVKDRGCVAINNVKQSMPSASQSTSRQRKGKLVFGASSTSNNASREPNKAISKEE
KVEAAKKEESKVQAFTGKKYSLTD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaccggcttgacaaagaagaaggtgcaattttaggctactcggtgttccaa
tatttacaatatgcgaaagcaagacgatatgctcataccagagctaatttaagaaaattt
ttagaacaatttggcaaacaactaagagaaattggaagcatagttgaacgtgagatattt
ggtcataaatattttgaagggtatgattaccatgatcactcgtttgagcataattatagg
tgttaccctgcatctcttattgaaaagccacatctcgaagctggtgggaagctcataatg
cctgcctctgctctccattacctctcttatctagacattgactacccgatgcaatttgag
ctgtcgaatgttgctgcaaacaggtcttcacactctggcgttttggagttcactgcagaa
gaaggcctgatctacatgccacattggatgatggaaaatttacttctaaaagtaggagat
acagtacatgtcagaaatgccagcctccccatgggcacatatgttaagatgcagccccac
actaaagatttcttggacatctcaaacccaaaggccatcctggaaactacactaagaacc
ttctcatgtttgacaaccggtgacagtatcatggtatcatataacaagaagaagtattac
atagatattgtggaaacaaagccttcttttgcaattagcatcgttgagacagactgtgag
gttgaatttgcacctcctcttgattgcaaagaacctgagcgacaagaaactccagtcctt
agaagcaaagcaccagctgaagttggggaagcgcaggtagaggaggaagttgatcacaaa
ttcacaccatttaccggcacaggaagaaggttagatgacaataccccaaaggacagagct
tcgaccagtgcttccacagtgaaggatagaggatgtgttgccatcaacaatgtcaagcaa
tcaatgccatcagcttcacagagtacctcgcggcaaagaaagggaaagcttgtttttggt
gcaagttccacttccaacaatgcttcaagagaaccaaacaaggccatctccaaagaagaa
aaagtagaagctgctaagaaagaagaatcaaaggtccaagccttcactggaaagaaatac
tccttgacagattga
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