Zingiber officinale (ginger): 122055283
Help
Entry
122055283 CDS
T08725
Name
(RefSeq) coronatine-insensitive protein homolog 1a-like
KO
K13463
coronatine-insensitive protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122055283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122055283
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122055283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122055283
NCBI-ProteinID:
XP_042472583
LinkDB
All DBs
Position
3B:complement(29714..34543)
Genome browser
AA seq
585 aa
AA seq
DB search
MEPKNCQMRLEVPDAALELVLGYMDDPLDREAVSLVCQRWYNIDARSRKQVTIAICYSTS
PDRLRRRFPNLESLKLKGKPRAAMFNLIPEEWGGYAGPWVRGLAESLSCLKSVHFRRMII
EDEDIDVLVRARGDKLKSIKIDKCSGFSTNGLMTIARSCKNMTTLFLEESSIVDNNSNDN
RWIRVLALNNCVLEALNFYMTELKVTPQDLELLARNCKSLSSLKISECDISFLIHFFQEA
TLLEEFGGGSFNDQVGEINMYQTVRFPPKLCCVGLMYMGTNEMHLLFPFATSLKKLDLQY
TFLQTEDHCQLIQRCPNLEVLEVRDVIGDRGLEVVAQTCKKLKRLRIERGDDEQGLEDEQ
GRVTQVGLSMLAQGCPELEYLAVYVSDITNAALEALGTFSKNLCDFRLVLLDREKKITDL
PLDNGVRSLLRGCTKLKRFALYLRPGGLSDLGLAYIGEYSGNVRWILMGNVGDSDIGLLR
FSRGCPRLQKLELRSCCFSERALAIAAQQLPSLRYLWVQGYGASQNGASFLSMAHRFWNI
ELIPPSQDTASEEVEDRRGEAQILAYYSLVGRRNDCPESVIPLLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaagaactgccagatgaggcttgaggttccggacgccgcgttggagttagtg
ctgggttacatggacgacccgctcgatagggaggcggtctcgttggtatgccagcggtgg
tacaacatcgacgcccggtcgcggaagcaggtgacgattgctatctgttactccacaagc
cccgatcggctccgccgtaggttccccaacctggagtcgctaaagctcaaaggcaagccc
cgcgctgccatgttcaacctcatcccagaagagtggggtggctatgctggtccgtgggtt
cgtggcctcgccgagtcccttagttgcctcaagtccgtccactttcgccgtatgatcatt
gaggacgaggacattgatgtgctggttagggctagaggggacaagctcaagtcgattaag
attgacaagtgctcaggattctcaacaaacggcctcatgaccattgcccgttcttgcaaa
aacatgacaacattattcttggaagaaagctcaattgttgacaataatagtaatgacaat
agatggattcgagttcttgctcttaacaactgtgtgttggaggcgttgaacttttacatg
acagaactcaaagttacaccgcaagaccttgagctacttgccaggaattgcaaatcatta
tcttctttgaaaatcagtgaatgtgatatctcttttctaatccattttttccaagaagca
acgttactagaagaatttggcgggggatcatttaatgatcaggttggagagatcaacatg
tatcaaacagttagatttcctccaaagctgtgttgcgttggccttatgtatatgggtaca
aatgaaatgcacttattatttccatttgctacttcgctcaagaagctggacttgcagtat
acatttctccagactgaggatcactgtcagctgatccaacgctgtccaaatttagaggtt
ctagaggttagggatgtgattggagatagagggttagaagtcgtggcccagacatgtaag
aaactgaaaagactcagaattgagcgaggtgatgatgaacaaggcctggaggacgagcag
ggtcgagtcacacaagttggtctatccatgctagctcaaggatgtcctgagctagagtac
ttggcagtatatgtctctgatataacaaatgcagcccttgaagctctcggcactttcagc
aaaaacctctgtgatttccggcttgttctgcttgacagagaaaagaaaataacagatcta
ccccttgataatggtgtccggtctctgctcagaggttgcacaaagctcaagaggtttgct
ctctaccttagaccaggcggactgtcggatttaggtcttgcttatattggagagtacagc
ggcaatgtccgctggatactgatgggcaatgttggtgattctgacatcggattgctgagg
ttttcgagaggatgcccgcgcttgcaaaagcttgagctaaggagctgttgtttcagcgag
cgtgctttggctattgcagctcagcaactgccttctttgaggtacttgtgggtgcaaggg
tacggggcatctcagaatggcgctagttttttgtcaatggcacatcggttctggaatata
gaattaattcctccaagccaggatactgcttccgaagaagtggaagataggcgtggagaa
gcgcagatacttgcctactactcccttgttggtcggagaaacgattgcccagaatctgtg
atcccactcctggcatga
DBGET
integrated database retrieval system
