Zingiber officinale (ginger): 122055340
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Entry
122055340 CDS
T08725
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122055340
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122055340
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122055340
03029 Mitochondrial biogenesis [BR:
zof03029
]
122055340
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
122055340
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
122055340
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122055340
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122055340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
LEM
Motif
Other DBs
NCBI-GeneID:
122055340
NCBI-ProteinID:
XP_042472655
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All DBs
Position
3B:489338..493643
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AA seq
694 aa
AA seq
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MAASEENLRRALAEKQASVDAQAETVRALKSSPDAHQAEVDAAVEALKALKVEAGAAARR
LEAAISSNTDGASSGSREAFRQAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSN
VLAFWRQHFVLEENMLEVDCPCVTPEIVLKASGHVEKFTDLMVKDEKTGMCYRADHLLKD
FCKEKLEKDLTLSSEKASELKHVLAVLDDLSAEELGAKLKEYGITAPDTKNLLSDPYPFN
LMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQG
LLRVREFTLAEIEHFVDPNDKSHPKFGDVAELEFFMFPREEQLAGKSAQPMVLGEAVSKG
IVNNETLGYFIGRVYLFLTLLGIDKERLRFRQHLPNEMAHYAADCWDAEIECSYGWIECV
GIADRSAYDLRAHSEKSGVPLVAHEKFPEPREVEKLVIVPSKKELGLAFKGNQKMVVEAL
EAMSEEEALEMKATLESKGEMDFHICTIGKTVSITKKMVSISMEKKKEHQRVFTPSVIEP
SFGIGRIIYCLFEHSFYTRPSKAEDEQLNVFRFPPLVAPIKCTVFPLIKSQKFDDVAKII
AKSLTATGISHIIDITGTSIGKRYARTDEIGVPLAITVDSTTSVTIRDRDSKQQIRIGID
EVASVVKEVTDGESTWGDVMWRYPTHSVLHTEDE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgcatccgaggagaacctccggcgagctctggcggagaagcaagcctcagttgac
gcccaagccgagaccgtacgcgctctcaagtccagtcctgacgcccatcaggccgaggtc
gacgccgccgtcgaggccctcaaagcgctcaaggtggaagcgggcgccgctgcccgccgc
cttgaagcggccatctccagcaacacagatggggcctcttctggaagcagggaagctttc
cgtcaggccgtcgtcaataccctcgagcggaggctcttctacattccatccttcaagatc
taccgcggtgtggctgggctctacgactacgggcctcccggatgcgccgtcaagtctaat
gtgctcgccttttggcgccagcattttgttctggaggagaacatgctggaggttgattgc
ccatgtgtcacacctgagattgtcctcaaagcatctgggcatgtcgaaaagtttacagac
ctgatggtgaaagatgagaagacagggatgtgctaccgggctgaccacttactcaaggat
ttttgcaaggagaagcttgagaaggaccttacgttgtcctctgagaaggcctcagagctc
aagcatgtcctagcagtgttggatgacctttccgctgaggaattgggagcaaagctgaag
gagtatgggatcacagctcctgatacaaaaaatcttctctctgatccttatccattcaat
cttatgttccaaacctccatcgggccatctggcctgagcccagggtatatgcggccagag
acagcacaaggaatctttgtgaactttaaagacttgtactattataatgggaataagctt
ccttttgcagctgctcagattggtcaggcattcagaaatgagatttcccctcgccaaggt
cttctaagggttcgagaattcactctagcagagattgagcattttgtagatcctaatgac
aagtctcaccccaagtttggtgatgtcgccgagttggaattttttatgttccctagggag
gagcagctagcaggtaaatcagcacagcctatggttcttggtgaggcagtttcaaaggga
attgtcaacaatgaaacacttggttacttcatagggagggtatacctctttttaacactg
cttgggattgataaagaacgattacgcttcaggcaacacctgccaaatgagatggctcac
tatgctgctgactgttgggatgcagagatagagtgttcctatggatggattgaatgcgtg
gggattgctgatagatctgcttatgacttacgggctcactcagagaaaagtggtgttcct
ttggttgctcacgagaaattccctgaacctagagaggttgagaaacttgttattgtacca
tcaaagaaagaacttggtctcgcattcaagggcaaccaaaagatggtggttgaagcattg
gaggccatgagtgaagaagaagcactggaaatgaaagccactttggaatctaaaggcgaa
atggatttccatatatgcaccattgggaaaactgtttccattacaaagaagatggtatct
atcagcatggaaaagaagaaagaacaccaaagggtcttcacgccttcggttattgagcca
tctttcggaattggacggataatttactgtctttttgagcattctttttacacaaggcct
agcaaagcagaagatgagcagttgaatgtgttccgttttcctcctcttgttgctcctatc
aaatgcactgtcttccctttgatcaaatcccaaaagttcgatgatgttgccaaaatcatt
gccaagtctcttacggcaactgggatttcacatatcatagacataacaggtacctcaata
gggaagaggtatgctaggacagatgagattggagtaccacttgccattactgttgattcg
acgacaagtgtaactatccgtgacagggatagtaagcagcagatccgtatcggcattgat
gaggtggcttcagtcgtgaaagaggtaacagacggcgaaagcacgtggggggatgtaatg
tggagatacccaacccattcagttctacatactgaagatgaatga
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