Zingiber officinale (ginger): 122055357
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Entry
122055357 CDS
T08725
Name
(RefSeq) syntaxin-43-like isoform X1
KO
K08489
syntaxin 16
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122055357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122055357
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
122055357
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Ortholog
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
GCP_C_terminal
FlxA
DUF2398
Motif
Other DBs
NCBI-GeneID:
122055357
NCBI-ProteinID:
XP_042472685
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Position
3B:656047..661162
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AA seq
331 aa
AA seq
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MATRNRTPIYRKYRDALRNVRSPSPTPLSGPSTSSSSFSVGGGGAVIELVSASLLRPDRS
YAPLSTEDPAGSSTGATMIGLPPAWVDVSEELAANMQRARTKMVELAKAHAKALMPSFGD
GKEDQHAIELLSHEITDLLKKSEKRLQKLSSSDPSEDSTVRKNVQRSLATDLQNLSMEFR
KKQSSYLKHLQHQQEGHDGFDLEMNRNGIGHKLEEDAFTDVGFSDVQISTLKKNEALTRE
REREIVQVVESVNELVQIMKDLSVLVIDQGTIVDRIDYNVQNVASSVEEGFKQLEKAERT
QKKGGMVMCATVLILLCLIMLVLLILKTILF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaggaaccggacgcccatataccggaagtaccgcgacgccctgcgcaacgtc
cgatccccttccccaactccgctctccggcccgtcgacttcctcctcctccttctccgtc
ggcggcggcggggccgtgatcgagctggtgagcgcctcgcttctccgacccgatcgctcc
tacgcgccactcagcaccgaagaccctgccggatccagtacaggtgccactatgattggt
ttacctccagcatgggtggatgtttctgaagaattagctgcaaacatgcagcgtgctcgg
acaaaaatggtagagttagccaaggcccatgcgaaagcattgatgccttcttttggggat
gggaaagaggatcaacatgccattgaacttctaagtcatgaaataacagatttgttgaag
aagtctgagaagagactacaaaaactttcctccagtgatccttctgaagattcaactgtc
cggaaaaatgttcagcggtctcttgcaactgacctccaaaacctctcgatggagttcaga
aagaaacagtcttcttatttaaaacatctccaacatcagcaggagggacacgatggtttt
gatttggagatgaatcgtaatggaattggacacaagttagaagaagatgcctttactgat
gtgggttttagtgatgttcaaatttccacactgaagaaaaatgaagcattgacaagagag
agggaaagggagattgtccaggttgtagaatcagtgaatgaacttgttcagatcatgaaa
gatctctcagtccttgtcatagatcaaggaaccatagttgaccggattgattacaatgta
cagaatgttgcaagttcagtggaagagggctttaaacagttagagaaggcagagagaacg
cagaaaaaaggtggaatggtcatgtgtgccactgtgctaattttattatgcctcatcatg
cttgtcctcttgatcctgaaaaccatactcttctga
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