Zingiber officinale (ginger): 122055458
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Entry
122055458 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 1b-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122055458
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122055458
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122055458
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
122055458
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
DUF3755
Motif
Other DBs
NCBI-GeneID:
122055458
NCBI-ProteinID:
XP_042472842
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Position
3B:complement(1734253..1739491)
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AA seq
479 aa
AA seq
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MASAIVNATTAVVEWASMAFDAPFADAVVFGVHVDGHLVVEVLLIAVILFQLTRKSYKPP
KKPLSEKEIDDLCEEWVPEPLHPPITEEMKVEPPTLESAAGPHTVIDGKEVVNFASSNYL
GLIGNETIIDSCVASLEKYGVGSCGPRGFYGTIDVHLDCEKRIAKFMGTPDSILYSYGIS
TIFSVIPAFCKKGDIIVVDEGVHWGVQNGLYLSRSNVVYFKHNDMASLESTLEKLAHGNK
QAEKVRRYIVVEALYQNSGQIAPLNDIVRLKEKYRFRIILEESHSFGVLGNTGRGLAELY
GVPIEKIDIITAGMGNALATDGGFCTGNARVVDHQRLSSSGYVFSASLPPYLASAAVAAV
NYLEDNPSVLMTLRRNIHLLWEGLSDVPGLMIVSDPLSPIVFLKLKNSTGSLKNDLELLN
KIAERVLKEDSVFIVSTKRSVLDKCRLPVGIRVFVSAGHTESDIKKVSESLRRVATENL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctattgtgaacgcgaccacggcagtagttgaatgggcttctatggctttc
gatgctccgtttgctgacgctgtcgtgtttggggttcatgtagatggacaccttgttgtt
gaagtgctacttattgctgtgatactgttccaactcactagaaaaagttataaacctccg
aagaagccacttagtgaaaaggaaatcgatgacctttgtgaagaatgggttcctgaaccc
cttcatccacctatcaccgaggagatgaaagttgagcctccgactttagaaagtgctgct
gggccgcatactgtaattgatggaaaggaagttgtgaactttgcttcttctaattatcta
ggattaataggcaatgaaacaataatcgattcatgtgttgcttccttagagaaatatggt
gtcggttcttgtggtccccgtggcttctatggaacaatagatgtccaccttgattgtgag
aagagaattgcgaagttcatgggtactccagattcaatcctatactcatatggcatctca
accattttcagtgttattccagcattttgtaagaaaggagatatcattgttgtagatgag
ggtgttcattggggagtgcaaaatggtctttatctctccagaagtaatgttgtttacttc
aagcacaatgatatggcgtcattggagagcactttggagaaattggctcatggtaataag
caagcagaaaaggtcagacgctacattgttgttgaagcattgtatcagaattcaggtcaa
attgccccattgaatgatattgtgcgattaaaggagaaataccgctttcggataatattg
gaagaaagtcattcttttggtgtacttggaaacactgggagaggtcttgccgagctttat
ggagttccaattgagaagattgatataataaccgctggtatgggaaatgcattggcaacc
gatgggggcttttgcactggaaatgccagagtagttgatcaccaacgtttgagtagctcg
gggtatgtattttccgcgtctttaccaccgtatcttgcaagcgctgctgttgctgcagtg
aattacttggaggataatccatctgtcctcatgacattgagaaggaacattcatctactt
tgggaaggcttgtctgatgtaccaggattgatgattgtaagtgatccattgtcgccaatt
gtcttcctaaaactgaaaaattctacaggatcgctgaaaaatgatttggaactccttaac
aaaattgccgaaagggtactaaaggaagattctgttttcattgtgagcacaaaaaggtcc
gttcttgataagtgccgccttccggtaggcattcgcgtgttcgtttcagcaggtcacact
gaatctgacatcaagaaagtgtctgagtcattgagaagagttgcaaccgagaatttgtga
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