Zingiber officinale (ginger): 122055531
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Entry
122055531 CDS
T08725
Name
(RefSeq) ABC transporter G family member 42-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122055531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055531
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122055531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_29
AAA_16
AAA_25
AAA_28
AAA
AAA_33
ABC2_membrane_3
RsgA_GTPase
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
122055531
NCBI-ProteinID:
XP_042472938
LinkDB
All DBs
Position
3B:complement(3657221..3667460)
Genome browser
AA seq
1500 aa
AA seq
DB search
MESVERVWDSGRRASRSLSRSISRGMNMGTWGMEDVFSRNSTRGRSGGSRSGVDDDEEAL
RWAALEKLPTYDRLRTGILRSAAADPGEERRQYHHREVDVRKLGIAERQEFIERVFKVAE
EDNERFLKKLRNRIDKVGIQLPTVEVRFQHLNVEANCHVGDRALPTLANTARDIVESTLS
LLGINLTKRTTLTILKDVSGIVQPSRMTLLLGPPSSGKTTLLLALAAKLDPTLKVSGEIT
YNGHRLDEFVPQKTAAYISQNDVHVGEMTVKETLDFSGRCQGVGARYDLLSELASREKDA
GIFPEAEVDLFMKATAIEGVENSLQTDYTLRILGLDICADTIVGDEMHRGISGGQKKRVT
TGEMIVGPTKVLFMDEISTGLDSSTTYQIVKCLQQIVHLGEATILMSLLQPAPETFDLFD
DIILLSEGQIVYQGPRDHVLDFFTSCGFRCPERKGTADFLQEVTSKKDQEQYWADKQKPY
RYISVSEFAQRFRRFHVGLRLENELSVPFDKARSHKAALVFSRKSVSYSELLKASFGKEW
LLIKRNSFVYISKTVMIVLVGFIASTVWLRPRMHTRNEDDGTVYIGALLFGLIVNLFNGF
AELSIAIERLPVFYKHRDLLFYPAWVFTLPNFLLRIPISILETIVWTVMTYYTIGYAPEA
SRFFKQMLLIFLIQQLAAGMFRSIAGLCRSIIISNTGGALSVLIMFVLGGFILPKGMIPN
WWIWGYWVSPLTYAYNALAVNEFLSPRWMNQKVNGIPLGTAILQNVNVFAEGRWYWIGAA
GLLGYSIIFNVLFTVCLMFLNPIGKPQAVISEETAREMEEVEDEAKDLPRLRRMSSKSES
VPHTLSKTDGNNTSEVMMMRMNPSHSNRYNREMSINAVTNVAPKRGMVLPFTPLSMSFDE
VNYFVDMPPEMKEQGVTEDRLQLLRNVTGTFRPGVLTALMGVSGAGKTTLMDVLAGRKTG
GYIEGDITISGYPKKQETFARISGYCEQNDIHSPQVTVRESLIFSAFLRLPQEVTVEEKM
KFVDEVMDLVELDNLKDAIVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA
RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGINSHEI
IKYFEAIPGVPKIKDKYNPATWMLEVSSVAAEVRLGMDFAEYYKSSNLFQRNKALVNELN
KPAAGTSDLYFPTKYSQSSWGQFKACVWKQWWTYWRSPDYNLVRFFFTLVTAVLLGTIFW
RIGLKREDSNSLRIVIGAMYAAVMFVGVNNCGTVQPLVSIERTVFYRERAAGMYSALPYA
LAQVLVEIPYVVVQAMYYALIVYSMMCFQWTAAKFFWFYFISFFSFLYFTYYGMMTVSLT
PNHQVAAILAATFYSVFNLFSGFFIPRPRIPKWWVWYYWICPLQWTVYGLIVTQYGDLEH
DFDVIGSGQPQRQRIKDYIKDYYGYNTDFMPIVATVLVGFAVFFAFMFAFCIKKLNFQQR
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtggagagggtgtgggactcggggcggcgggccagccggagcctgagccgc
agcatcagccgcgggatgaacatgggcacctgggggatggaggacgtgttctcgcggaac
agcacgcgggggcgctccggcggcagccgcagcggcgtcgacgacgacgaggaggccctg
cggtgggccgccctcgagaagctgcccacctacgaccgcctccgcaccgggatcctccgc
tccgcggcggcggatccgggcgaggagcggcgccagtaccaccacagggaggtggacgtg
cgcaagctgggcatcgccgagcgccaggagttcatcgagcgcgtcttcaaggtcgccgag
gaggacaatgagcgattcctcaagaagctccgcaatcggatcgacaaggtcggcatccag
ttaccaacagtagaagtaagatttcaacacctaaacgtggaggccaactgccatgtcgga
gacagagctcttccgacgctcgccaatacagccagagacatcgtcgagtccaccctctcc
ctcttgggtataaacctcaccaagagaaccaccctcacgatcctgaaggacgtctcagga
atcgtacagccgtcaaggatgacactgttgttaggccctccatcatctgggaagaccacc
cttttgttagctttggccgcgaagcttgacccaactctaaaggtcagcggagagataact
tacaacgggcacaggttggacgagtttgtgccacagaaaactgcagcatacatcagccag
aacgacgtccacgtcggggaaatgactgtcaaagaaactcttgatttctcgggaaggtgc
caaggagtaggagcccgatacgatcttctttcggaactcgcaagtagggagaaagatgcg
ggaatatttccagaagctgaagtggatctcttcatgaaggctacagcgattgaaggagtg
gagaacagtcttcaaacggactacactctcaggatactgggattagacatttgcgccgat
acgattgtgggggacgagatgcacagaggcatttcaggaggtcaaaagaagcgagtcaca
acaggcgagatgatcgtcgggccgacgaaggtgctgttcatggacgagatctcgacgggg
ctggacagctcgaccacctaccaaatcgtgaaatgcctgcagcaaatcgtccacctcggc
gaagccacgatcctcatgtctctcctccagccggcccccgagaccttcgacctcttcgac
gacatcatcctcctctccgagggccagatcgtctaccagggcccgcgcgaccacgtcctc
gacttcttcacctcctgcggcttccgctgccccgaacggaaaggcaccgccgacttcttg
caagaggtgacgtcgaagaaggaccaggagcagtactgggcggacaagcagaagccatat
cgctacatttcggtgtccgagttcgcgcagcgattccggagattccacgtcggccttcgc
ctcgagaacgagctgtccgtccccttcgacaaggcccgcagccacaaggccgctctcgtc
ttctctagaaagtccgtctcctactcggagctgctcaaggcctcgttcggaaaggagtgg
cttctcatcaagcgcaactcctttgtctacatctccaagaccgttatgattgtcctggtg
gggttcatagcctcgaccgtgtggctgaggccacgcatgcacacaaggaacgaagacgat
gggaccgtttacataggggcgcttttgtttggcttgatcgtgaatctcttcaatggtttt
gcggagttgtcaattgccatcgagcgtctgcccgtattctataagcacagggatctcctc
ttctaccctgcatgggttttcaccttgcccaattttctccttcggatacccatatcaatc
ttggagaccattgtttggactgttatgacctactacaccatagggtatgcgccagaagca
agcagattcttcaagcagatgctgctaatattcttgattcagcagttggcagcaggcatg
ttcagaagcattgctggcctttgtaggtctataatcatatccaacaccggcggggcactt
tctgttctcatcatgtttgttcttggaggcttcattctaccaaaaggaatgatcccaaat
tggtggatatggggatattgggtttcaccgcttacttatgcgtataatgctttagctgtg
aatgagtttttgtctccaaggtggatgaaccaaaaggtaaatggtatacctctaggaaca
gcaatccttcaaaatgtcaatgtatttgcagagggaagatggtattggattggagccgct
ggacttcttgggtatagcatcatcttcaatgtcctatttacagtctgcctgatgtttttg
aatcctattggaaaaccacaagctgttatatctgaagaaacagcaagggaaatggaagaa
gtcgaagatgaagcaaaggatttgccacgactgagaaggatgagctctaagagtgagtct
gtacctcacactttgtcaaaaacggatgggaacaacaccagtgaagttatgatgatgcga
atgaatcctagtcactcaaacagatataatcgtgaaatgtccatcaatgcagtcacgaat
gttgctcctaagagaggaatggttcttccatttacacctctttccatgtcctttgacgaa
gtcaattactttgtcgatatgcctccagaaatgaaagagcaaggagtcacagaagatagg
ctccaactgctaagaaatgtgacagggacttttagaccaggggtcttaacagcacttatg
ggagttagtggtgctggtaaaaccaccctcatggatgttctggctggaagaaagactggt
ggctacattgagggagacatcactatctcagggtacccaaagaaacaagagacttttgca
aggatttctggttactgtgagcaaaatgatatccactcacctcaggtgacagtccgagaa
tccttgatattttctgcttttctccgccttccacaagaagtcactgttgaagaaaaaatg
aaatttgttgatgaagtgatggacctagttgagcttgacaacctgaaagatgccatagtg
ggtcttccaggaatcacagggctttccactgaacaaagaaagagactgacaatagcagta
gagcttgttgctaatccttctatcatcttcatggatgaaccgacatctggtcttgatgca
agagctgcagccattgtcatgagaactgtgaggaacacagttgacactggaagaactgtt
gtttgcacaatccaccaaccaagtatagatatatttgaggcgtttgacgagcttctgcta
atgaaaagaggtgggcaagtgatatactctggacctttggggataaattctcacgagata
atcaaatactttgaggcaattcccggagttccaaaaatcaaggacaaatataatcctgcg
acatggatgcttgaagttagttcagttgctgccgaagtacgtttgggaatggattttgct
gagtattacaagtcatcaaatctattccagcgcaacaaagcattagtgaatgagctcaat
aaaccagcagcaggaacaagcgatctatatttccctacaaagtattcacaatcatcatgg
ggacagttcaaagcctgtgtctggaagcagtggtggacttactggagaagccctgattat
aaccttgtcagatttttcttcaccttggtcactgctgtactgttagggaccatattctgg
aggattggccttaaaagggaggattctaacagtcttagaattgtcattggagccatgtat
gctgcagttatgtttgttggtgttaataactgtgggactgtgcaaccacttgtgtcaatc
gagaggactgtcttttatcgggaacgggcagctggaatgtactccgccttaccatatgct
ctagctcaggtgcttgtggaaataccatatgtggtagttcaggcgatgtattatgctctt
atcgtatactccatgatgtgcttccaatggactgcagcaaaattcttctggttctacttc
atttccttcttctctttcctatacttcacttactatggaatgatgaccgtctctctcaca
ccaaatcatcaagttgctgcaatccttgctgccacattctactccgtcttcaatctcttc
tccggctttttcattcctcgaccaagaattcccaaatggtgggtctggtactactggatt
tgcccacttcaatggactgtttatggactcatagtgacccaatatggtgatttggaacat
gacttcgatgtgataggatcaggtcaacctcaacgtcaaaggatcaaagactatatcaag
gactactatggatacaacactgacttcatgcctattgttgccaccgtgctagttggcttt
gctgtcttctttgctttcatgtttgcattctgtatcaagaagttgaacttccagcagagg
taa
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