Zingiber officinale (ginger): 122055807
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Entry
122055807 CDS
T08725
Name
(RefSeq) dual-specificity RNA methyltransferase RlmN-like
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122055807
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
122055807
Ribosome biogenesis [BR:
zof03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
122055807
SSDB
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GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
122055807
NCBI-ProteinID:
XP_042473377
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All DBs
Position
3B:8557662..8560968
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AA seq
440 aa
AA seq
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MTIKRRRRTTVPFGYSSRCLSMAVLIRWTAYSLSSMVCFPSTNASARLNMPRGSFSRFSG
GRPFSTSPIHQESGDPRSSKVTLKGMDFRELENWVQSQGFRSGQALMLWKCLYGNNSWAQ
SCDELTGLNKEFRKMLSANVSLTALSLKEVLTASDGTRKILFTLEEGSVIETVVIPCRQG
RTTVCVSSQIGCAMNCQFCYTGRMGLKRHLSTAEIVEQAVFARRLFTSELGSITNVVFMG
MGEPLHNIDNVIKAAAIMVHDQGLHFSPRKVTVSTSGLVPQLKRFLRESPCALAVSLNAT
TDEVRNWIMPINMKYKLSLLLNTLKEELSSKHKYKVLFEYVMLAGVNDSIEDSKRLIELV
RGIPCKINLISFNPHCGTLFKPTAKDKMIEFRNVLAEAGIAVFLRLSRGDDKMAACGQLG
KPGDVQAPLLRVPGRFQMAV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacgataaagcgccgccgccgcaccaccgttcctttcggctactcctcccggtgcttg
tccatggccgtgctcattcgatggacggcctattctctctcctctatggtttgctttcct
tctacaaatgctagtgctcgcctaaatatgccacgaggatccttttccagattttccggc
ggtcgccccttctcgacttcgccgatccatcaagaatctggcgatcctaggagctccaaa
gtcacgttgaaggggatggattttcgagaactcgaaaattgggttcagtctcaaggattt
aggtccgggcaggcattgatgttgtggaaatgcctctacggaaacaacagttgggcacag
agctgcgatgaattgacagggttaaataaagaatttagaaaaatgctgagtgcaaatgtt
tctctaacggcattgtcactgaaagaagttctaacagcatcagacggaactcgaaagatt
ttgttcacgttggaagagggatcagtgatcgaaacagttgtcatcccctgcagacaaggg
agaactactgtatgtgtttctagtcaaattggctgtgccatgaattgtcagttctgctac
actgggaggatgggcttaaagaggcatttgtcaacggcagaaattgttgagcaagctgtg
tttgcacgcaggttattcacaagcgaattgggatccatcacaaatgtggtattcatgggc
atgggcgagccgttgcacaacatagacaatgtcatcaaagcagctgccataatggttcat
gaccaaggcctccattttagcccaaggaaagtcactgtttcgaccagtggacttgttcct
cagttaaaacggtttctccgtgaatcgccatgtgcattggcagttagtctaaatgctact
acagacgaggtgagaaattggattatgccgatcaacatgaagtacaaactgagcctcctc
ctcaacacattaaaggaagaactctcatctaaacacaagtacaaagtattatttgaatat
gtgatgcttgctggagtgaatgacagcatagaggattccaagaggcttattgaacttgtt
cgaggcattccttgcaagataaatctcatctcatttaaccctcattgcggaactctattc
aagccgactgcaaaggataagatgatcgagttccgcaacgtcctcgcagaagcaggcatc
gccgtgttcttgcgactcagcaggggggacgataagatggcagcttgtgggcagctagga
aagcctggagatgtgcaagcgccattgcttcgtgttcctgggagatttcaaatggctgtg
taa
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