Zingiber officinale (ginger): 122055833
Help
Entry
122055833 CDS
T08725
Name
(RefSeq) pleiotropic drug resistance protein 2-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122055833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055833
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122055833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
AAA_25
AAA_33
RsgA_GTPase
nSTAND3
AAA_28
AAA_30
ABC_ATPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
122055833
NCBI-ProteinID:
XP_042473406
LinkDB
All DBs
Position
3B:9023042..9032065
Genome browser
AA seq
1482 aa
AA seq
DB search
MANDIIRNSSSRRSWAESFQDRADVFQRSRMTDEGDDEENLKWAALEKLPTYDRMRKGIL
RKMAENGNVITSEIDVNQLGPQDRKQLLDHIFKVVEEDNERFLTRLRDRIDRVGLELPKI
EVRYENVSVEADVHVGSRALPTLWNFTVNILEDIVGLVRLNRTKKKNLKILNDVSGILKP
TRMTLLLGPPASGKTTLLLALAGKLDRSLRQRGRVTYCGHELSEFVPQRTSAYISQLDIH
NGEMTVRETLDFSARCLGVGSRYEMLSELSRREKDAGIKPDPEIDAFMKAAAMKGQKTNV
STDYILKVLGLDICADIFVGDQMRRGISGGQKKRVTTGEMLTGPARALFMDEISTGLDSS
TTFQIIRFMRQMVHVMDGTVLISLLQPAPETFELFDDVILISEGQIVYQGPREHVVEFFE
SVGFKCPERKGVADFLQEVTSKKDQAQYWTNKDKPYRFISVPEFVELFKKFHVGRQLAAE
LSVPYDKSKAHPAALTTERYGISNWEILKACFSREWLLMKRNSFIFIFKTTQITTLSLIA
SSVFFRTEMHHRTIADGNKFFGALFFTLTNIMFNGMAEIVMTVEKLPVFYKQRDFLFFPP
WAFGIVYTLLKIPLSFLDTGIWIVLTYYIIGFAPAAGRFFRHFLALLLTHQMALGLFRFI
AAASRTMVVANTFGTFALLIVFVLGGIVISKDDIKPWWIWGFWSSPLMYGQNAICINEFL
DPRWGGNNTDASISASTVGTAFLKSRGMFTSGYWYWLAIGALIGFIILFNILFVLSITYL
NPFASAQNAIVDEESSKKKKNSSIENGRVEMIENASSARQDISDAARRKSSESFSASVRP
AKRGMVLPFQPLSLAFHHVNYYVDMPAEMKSQGVEEDRLQLLSDVSGAFRPGVLTALVGV
SGAGKTTLMDVLAGRKTGGYIEGEISISGYPKNQETFARISGYCEQNDIHSPYMTIYESL
VYSAWLRLASDIDNQTRLVSCNFCFHPIAPLRVLHYYELICLMQMFVEEVMELVELDTLR
DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT
GRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGRQSHRLVEYFEAIPGVPKIADG
INPATWMLDVSSTQAETSLNIDFAEVYANSPLYQQIEELIKELSIPAPNSKDLFFPTKYS
QTFTVQCQACFWKQYWSYWRNPQYNAVRFFMTTVIGLIFGTMFWNKGKQTSTQQDVLNLL
GAFYAAVFFLGSSNSINVQPVVAVERTVFYRERAAGMYSAWAYAFAQVSIEVLYIVVQGF
IYTILLFSMIGFTWRVSNFLWFFYFIVMCFTYFVLYGMMAVAVTPNHQVAGIVSSFFFNF
WNLFAGFLITRPELPIWWRWYYWGNPVSWTIYGVIASQLGKRGGSVRVPGEASEPLLTDY
LNDTLGYEYSFVKWAALTNVGFVVVFFVVFAYSIKFLNFQKR
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgacatcatccggaacagcagcagccgacggagctgggcggagagcttccag
gaccgggcggatgtgttccagcgcagccggatgaccgacgagggcgatgacgaggagaat
ctcaagtgggcagcgctggagaagctgccgacatacgaccggatgaggaagggaatcctc
cggaagatggcggagaacgggaacgtcatcacaagcgagatcgatgtcaaccagctcggc
ccgcaggaccggaagcagctgctcgatcacatcttcaaggtggtagaggaggacaacgag
cgcttcctcactcgcctccgagaccgtatcgaccgagtcgggctggaacttccaaagatt
gaggtccgatatgagaacgtatcagtggaggcagatgtgcacgtcggaagcagagcactg
cctaccttgtggaatttcactgtcaacattctcgaggatattgttggcctcgtaagatta
aatcgaaccaagaaaaagaatttaaagattcttaatgatgtcagtgggatattaaagccg
acaaggatgacattgttgcttggacctccagcttcagggaaaacaacactcttgcttgcc
ttggcggggaagcttgatagaagtctaagacaacggggtcgagtcacatattgtggccat
gagctgtcagaatttgttcctcaaagaacttctgcttacattagtcagttggatattcac
aatggcgagatgacagttcgagaaacattggatttctcagcacggtgtttgggtgtagga
tcaaggtatgagatgttatcagaattgtcaagacgagagaaagatgcaggtattaaacca
gatcctgagattgatgcattcatgaaagctgctgcaatgaaagggcagaaaaccaatgta
tcaaccgattatattctcaaggtacttggtttggacatttgtgcagacatctttgtcggt
gatcaaatgcgacgtggcatttctggaggacaaaagaagcgtgtgacaactggagagatg
ttaactgggcctgcacgagcacttttcatggatgaaatatcaactggacttgatagttct
actaccttccaaataataaggttcatgagacagatggtccacgtcatggatggaacagtg
ctcatttctcttcttcaaccagcacctgagacatttgaactatttgatgatgttattttg
atatctgagggccaaatagtctatcaaggtcctcgggagcacgttgttgagttctttgag
tctgttggttttaaatgccctgaaaggaaaggtgtcgctgactttcttcaagaggtaact
tcaaagaaggatcaagcacagtattggactaataaggacaaaccttaccgttttatttca
gtacccgagtttgttgagctttttaagaaatttcatgttgggagacaactagctgcagag
cttagtgttccttatgataagtctaaagcccatcctgcagcactgacgacagaaagatat
ggtatttctaactgggaaattttgaaggcatgtttttcgagggagtggttgctgatgaag
agaaattcttttatctttatttttaagacaacccagataaccacactttctttgatagcc
agttctgtgtttttcagaacagaaatgcaccatcgaacgattgctgacggtaacaaattt
tttggtgcactattctttaccttgacgaacatcatgttcaatggaatggcagaaattgtg
atgactgttgagaagctccccgtattttataaacagagagatttcttgtttttccctcct
tgggcttttggcattgtatacactcttctcaaaattcctctttcatttctagacacgggg
atttggatcgtacttacttactatatcattggttttgcccctgctgcaggacggttcttc
cgccacttccttgcacttctccttacccatcaaatggctcttggtctgttccgcttcatt
gctgcagcatcaagaacgatggttgttgccaatacatttggaaccttcgccttgcttatt
gttttcgtgctaggagggattgtcatctctaaagatgacatcaaaccctggtggatatgg
ggtttctggagttctcccttaatgtatgggcaaaatgctatttgtattaatgagttcctt
gacccaagatggggcggaaacaacactgacgcaagtatatccgcttcgactgtgggaaca
gcttttcttaaatctagaggaatgtttactagtggctattggtattggcttgcaattgga
gccctcataggatttattatcctattcaacatattgtttgtcctttcaatcacttacttg
aatccttttgcaagtgctcaaaatgcaattgttgatgaggaatcaagtaagaaaaagaaa
aactcatcaatagaaaatggaagggttgaaatgatagagaatgcaagttctgctcggcag
gatatatctgatgcagcaaggagaaaaagctctgaaagttttagcgcttcagttcgtcca
gcaaagagaggaatggttttgcctttccagcctctttctcttgcttttcatcatgtgaac
tattatgttgacatgcctgctgaaatgaagagccaaggagttgaggaagatcgtctgcag
ttgctgagcgacgtaagtggtgcatttaggccaggagtcctgactgcattggttggagtt
agtggagcaggaaagactacattgatggacgttctagcaggaagaaaaactggtggttat
attgaaggcgagattagtatttctggttatcctaaaaatcaggagacttttgctagaata
agtggatactgtgaacaaaatgacattcattcaccatatatgactatttatgaatcactt
gtttactctgcttggctgcgtcttgcatcagacattgacaaccaaacacgactggtcagt
tgcaatttttgtttccatccaattgcacctttaagagtgttgcattattatgaattgata
tgtttaatgcagatgttcgtggaggaggtcatggagttggttgaacttgatactctaaga
gatgctctagttggccttcctggggttaatggtttatcaactgagcagagaaaaagactg
acgattgctgttgaacttgttgcaaatccatccatcatcttcatggatgagccaacatca
ggacttgatgcaagagcagcagccatagttatgaggacagttagaaatacagttgacaca
ggacgaactgtcgtgtgtacaatccaccaaccgagcatagacatttttgaagcttttgat
gagctacttttgatgaaaaggggaggtcaagttatatatgctggccctcttggtcgccaa
tctcacaggcttgttgaatattttgaagcaattccaggggtaccaaaaatcgctgatggt
attaaccctgcaacatggatgttggacgtaagcagtacccaagccgagactagcttgaat
attgactttgcagaagtttatgccaattccccactttatcaacaaatcgaagaacttata
aaagaattgagtattccggcaccaaattcgaaggatctattcttccctacaaaatactcg
cagacttttactgttcaatgccaagcttgtttctggaaacaatattggtcttattggaga
aacccacaatacaatgctgtccgattcttcatgacaactgttatcggtttaatatttggc
acaatgttttggaataagggcaaacagactagcactcaacaagacgttctgaatctactc
ggagctttctatgctgcggtcttcttccttggatccagcaattctatcaacgtgcagccg
gttgtggctgttgagaggacggtcttctaccgtgaaagagctgccgggatgtactcagca
tgggcctatgcatttgctcaagtgagcatcgaggtgctatacatagtggtacaaggattc
atctacacgattcttcttttctcgatgattggctttacttggcgcgtatccaacttcttg
tggttcttctacttcatcgtcatgtgctttacctattttgttctgtatgggatgatggct
gtggcagtcacgcccaaccatcaagtcgcgggcatcgtctccagcttcttcttcaacttc
tggaacttgttcgcgggctttctcattacacgaccggaacttcctatctggtggaggtgg
tactactggggaaatccagtatcttggacaatttatggtgtcattgcatcgcagttgggg
aagagaggtggcagtgtccgcgttcctggagaagcaagcgagccgctacttacggattac
ttgaacgataccctgggctacgagtacagcttcgttaagtgggcggcattgactaacgtg
ggtttcgtcgtcgtgttcttcgtagtcttcgcctactcgatcaagttcctcaacttccaa
aagcgatag
DBGET
integrated database retrieval system
