Zingiber officinale (ginger): 122055844
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Entry
122055844 CDS
T08725
Name
(RefSeq) egalitarian protein homolog
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122055844
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122055844
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
KH_1
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-GeneID:
122055844
NCBI-ProteinID:
XP_042473422
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Position
3B:9693378..9699355
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AA seq
336 aa
AA seq
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MATSDLPDLSHLSIDPGPPENTSEFPTVPIHIVTSASQLPPEFLDPPADKQIVIGLDCEG
IDLCREGALCVMQLALANAIYLVDAIDGHEALIQACKPALESTNILKVIHDCKRDSEALY
FQYGIKLNSVFDTQIAYSLIEEHEGRKQSPNDYISFVALLADPRYCGVSYLEKEEVRDRL
RQDPEFWTYRPMSEIMIRAAADDVRFLLHIYQKMMLKLNNKSLWHLALRGSLYCRCFCTN
DNEYADWPSLPVLSEDLIAEGYSPEQEILSILNVPPGKMGRVIGKRGASIQSVKECCGAE
IIIGGAKGPPDKVFIIGPVKQVRKAEALLRGQMLDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccgatctccccgatctctctcatctctcgatcgatccaggtcctcctgag
aatacatctgaatttccaacagttcctatacatattgtcaccagtgcatctcagctgcca
cctgaatttcttgatcctccagctgataagcagattgttattggtcttgattgtgagggc
attgacctatgtcgagaaggagccctatgtgtaatgcagcttgcacttgccaatgcaatt
taccttgttgatgcaatcgacggtcatgaggcactcatccaggcttgtaagcctgcactt
gagtcaactaacattctgaaagtcattcatgactgcaaacgggatagtgaggctctatat
tttcaatatggcattaaactaaacagtgtttttgatactcagattgcatattctttgata
gaggagcatgaaggaaggaagcaatcacctaatgactacatatcctttgttgcgcttctt
gcagatcctcgctattgtggagtttcctatctcgaaaaggaagaagtgcgagatcgattg
agacaggatcctgaattttggacataccgaccaatgtctgaaataatgattcgagcagct
gctgatgatgtccgttttctccttcatatctaccaaaaaatgatgttgaaactgaacaat
aaatccttgtggcaccttgcacttcgtggctcactctattgcaggtgtttttgcaccaat
gataatgagtatgcagattggccatctcttcctgttctttcagaggacctaattgctgaa
ggttattctcctgaacaagaaatattatcgatcttaaatgttcctcctgggaagatgggg
cgagtgattggtaaaaggggagcttctatccagtctgtgaaagaatgttgcggtgcggag
atcattattggtggtgcaaagggcccccctgacaaggtgttcatcattgggcctgtgaag
caggtccggaaagctgaagcactgcttcgaggacaaatgctcgatttttaa
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