Zingiber officinale (ginger): 122055853
Help
Entry
122055853 CDS
T08725
Name
(RefSeq) protein DETOXIFICATION 48-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055853
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
122055853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
122055853
NCBI-ProteinID:
XP_042473433
LinkDB
All DBs
Position
3B:complement(9934971..9946338)
Genome browser
AA seq
543 aa
AA seq
DB search
MCNLTSTSYPKSNLLASHDDLHRHPTLSELAEEMRAIGKISVPAAVTGLMLYSRAMISML
FLGYLGELELAAGSLAIGFANITGYSVLSGLAMGMEPICAQAFGADRRRLLGLTLQRATL
LLLCASLPIVFLWLNARAILLRCGQDEEIATAAQVFVAAASPDLLFLSFLHPLRVFLRAQ
NITLPITYCSSFCVALHCPLTYLLAVRLRLGIAGVAAAMVLTNLNFLVCLLLFLLYSGAC
RDTWPGSGSILSGECLRGWPALLRLAAPSCVSVCLEWWWYELMILLSGLLAHPRAAVASM
GILIQTTSLVYVFPSALSFGVSTRVGNVLGANRPTKARAAAAAALAAALALGLAATAFTA
SMRHQWGRLFTRDAEILHLTSLALPIAGLCELGNCPQTAGCGVLRGSARPATGANINLGS
FYFVGMPVAILLSFVGKMGLPGLWLGLLAAQAACATLMACAVARTDWAAEAERARELTNS
SSSPTLPITNSNGTIPITTIATALSPNHMEAEKKKKTTTTLEDILSIINADAPETAPLIL
PVD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatcttacttctacttcatatcccaagtctaaccttttggcaagccatgacgat
cttcaccgccatcccacgctctccgagttggcggaggagatgcgggcgatcgggaagatc
tcggtgccggcggcggtcaccggcctgatgctctattcgcgcgcaatgatctcgatgctt
ttccttgggtatctcggcgagctggagctcgccgccggatcgctggcgatcgggtttgct
aatatcactggttattctgtgctgtcgggactggcgatggggatggagcccatctgcgct
caggccttcggcgccgatcggcggcggctccttggtctcaccctccagcgcgccaccctg
cttctcctctgtgcctccctccccatcgtcttcctctggctcaacgcccgcgctatccta
ctgcggtgcgggcaggacgaggagatcgccacggcggcgcaggtgttcgtcgccgccgcc
tcgccggatctcctcttcctctcatttctccacccgctccgcgtctttctccgtgcgcag
aacatcaccctcccgatcacctactgctcctccttctgcgtcgcgctccactgccccctg
acgtacctcctagccgtccgcctccgtctcggcatcgccggagtggcggccgccatggtg
ttgaccaacctcaacttccttgtttgccttctcctcttcctcctctattcaggcgcctgc
cgcgacacgtggcccggcagcgggagcatcctctcaggcgagtgcctccgcgggtggccg
gctctgctccgcctggcagcaccgtcctgcgtctctgtctgcctcgagtggtggtggtac
gagctgatgatcctcctcagcggtctgctcgcgcatcctcgcgccgccgtcgcctccatg
ggcatcctcatccagaccacctccctcgtctacgtcttcccctccgcgctcagcttcggc
gtctccacccgcgtcggcaacgtcctgggcgccaaccgccccaccaaggcccgcgccgcc
gccgccgccgcccttgctgccgccctcgccctcggcctcgccgccaccgccttcaccgcc
tccatgcgccaccagtggggccgcctcttcacccgtgacgccgaaatcctccacctcacc
tccctcgcgctccccatcgccggcctctgcgagctcggcaactgcccgcagaccgccggt
tgcggcgtcctccgcggcagcgcgcggccggccaccggcgccaacatcaacctcggctcc
ttctacttcgtcggtatgcccgtcgccatcctcctcagcttcgtcggaaagatgggcctg
ccggggctgtggctgggtctcctggcggcgcaggccgcgtgcgccaccctcatggcctgc
gccgtcgccagaacagattgggcggcggaggcagagcgcgccagagaattaaccaactct
tcttcttctccaacccttcctattactaattccaatggcacaattccaatcaccacaata
gctactgctctgtctcccaaccacatggaagccgagaagaagaaaaagaccaccacaaca
ctagaagacattctatccatcattaacgctgatgctccagaaacagcccccctcattctc
cctgtggattaa
DBGET
integrated database retrieval system